Pairwise Alignments

Query, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  141 bits (355), Expect = 2e-38
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 4/313 (1%)

Query: 1   MKTVAMALFPDFLLLDMAGPLEVFSIANRYLPAAEHYRILTLGTEPGPLRASNGVAVQTD 60
           M+T+A  L P F  +     +E   +ANR+      +++L+L  E   + ASNG+++  D
Sbjct: 6   METIAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEA--VLASNGMSINAD 63

Query: 61  LLLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGLLD 120
             L + + A  LL+V G     N   P LL  L+     A   G I TGA VL  AGLL+
Sbjct: 64  AALGEGEPANILLVVAGFEPLANVA-PKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLE 122

Query: 121 NHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGKQV 180
            +R T HW   E   + +P  +  T  ++  D   IT  G TA IDL L ++AQ HG ++
Sbjct: 123 GYRATLHWEALEAFKERYP-GLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSEL 181

Query: 181 AVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAALAG 240
           AV V++  ++   RQ    Q   + A        +      + +H+  P +   +AA   
Sbjct: 182 AVKVSEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIK 241

Query: 241 MSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRFLF 300
           ++ R   RLF   +  TP  F  G R+D+ARQLL  TD+ +  V+   GF    +    +
Sbjct: 242 VTRRQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRY 301

Query: 301 SEKLGLNPTQYRQ 313
             + G  P + R+
Sbjct: 302 KLRFGRCPREERR 314