Pairwise Alignments

Query, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

 Score =  147 bits (370), Expect = 5e-40
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 3/311 (0%)

Query: 2   KTVAMALFPDFLLLDMAGPLEVFSIANRYLPAAEHYRILTLGTEPGPLRASNGVAVQTDL 61
           +++   L  +F L+ +A  +E   +AN+ L   E YR  TL  + G + AS+G+ +  D 
Sbjct: 17  QSIGFLLLDNFTLISLASAVEPLRMANQ-LSGRELYRWHTLTIDGGQVWASDGLQITPDA 75

Query: 62  LLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGLLDN 121
            +  A    D ++V GG G         + WL+A A ++RR G++CTG++ L  AGLLD 
Sbjct: 76  AISNAPPI-DTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALACAGLLDG 134

Query: 122 HRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGKQVA 181
              + HW     + +AFP+  + T R++  D    TS G TA +D+ L ++++DHG++++
Sbjct: 135 FDCSVHWECLAAMQEAFPRVNMST-RLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELS 193

Query: 182 VDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAALAGM 241
             ++++ +    R     Q  P+   +   +  +  +   +  +L EP  ++ +A    +
Sbjct: 194 AAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVSV 253

Query: 242 SARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRFLFS 301
           S R   RLF K +  +P  +    R+ RARQLL+ T + +  VA   GF S  H    + 
Sbjct: 254 SRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYR 313

Query: 302 EKLGLNPTQYR 312
           E  G+ P   R
Sbjct: 314 EYFGIPPRDER 324