Pairwise Alignments

Query, 507 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 956 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  240 bits (613), Expect = 1e-67
 Identities = 168/466 (36%), Positives = 245/466 (52%), Gaps = 23/466 (4%)

Query: 33  FGAYVFHRQQRRVSKSGWPVPLGGRALDILTVLLETPGQFISKATLIERVWPNSVVEENN 92
           FG +     +R ++K G  + +GGRA D+L  LLE PG+ +SK  LI  VWP+ +VEE +
Sbjct: 18  FGPFRVVPGKRLLTKDGTALDIGGRAFDLLIALLERPGRVVSKRELINLVWPDIIVEEGS 77

Query: 93  LRVHIAALRRAL----DGQRYILNDPQRGYCFAVKLQEG---LPATLPRH---NLSARLS 142
           LR H+  LRR L    DG RYI      GY F   ++     LPA    H   N   RL 
Sbjct: 78  LRFHMTGLRRILGDGEDGARYINTQVGVGYAFVAPIERAARPLPAPHSLHRGANGVGRLP 137

Query: 143 ---AVMGCEALLGVLVRRLSGLQLMTLTGCAGVGKSTLALALAERVLPRYRDGVWWVDLA 199
              +++G  A + +++ RL   +L T+ G  GVGK++LA+           D V +VDLA
Sbjct: 138 PRPSLIGRNADVALVMERLRQPKLFTIVGPGGVGKTSLAVETGH--CRAEDDAVHFVDLA 195

Query: 200 TVEA----PVAMLRHLATALHLEPIASATELGHQLASRQLLLVLDGADLLLGACRHLVRV 255
            VE     P+A+   L  A+  E       L H L S++LLL+LD  + L+ A   +V  
Sbjct: 196 QVEGADLVPIALASSLGIAVQAEEPMQVL-LAH-LRSQRLLLILDNCEHLIDAVCAIVEQ 253

Query: 256 LREKAPQVSVLVSSREALHVAGEWVQRVPRLAVPAPSALGSVEQAMAYPAVQLFAARASA 315
           +++ AP V++L +SRE L   GE V R+  LA P+     SVEQ + +PAVQLF  R  +
Sbjct: 254 IQDAAPGVTLLATSREPLRARGEHVYRLNPLAFPSELQDLSVEQLLGFPAVQLFVERVCS 313

Query: 316 GQQGFVLRPQDLAPLRDICRRLDGIPLALELAAAQVDALGVRGLQQQLSKGLQVLTRGRR 375
                 L P D   + D+C+RL+G+ L +ELAA +V   GV      L +   +   GRR
Sbjct: 314 SNAALALAPGDARLIADMCQRLEGMALPIELAAVRVAVHGVHATHALLGERFSLGWAGRR 373

Query: 376 TAVERHQSLTAALDWTYQRLSLPERWLFLQLSLFKMAVTLPTLSKLVSGTELEHADLSYL 435
           TA+ RHQ+L A LDW+Y  LS  ER +F +L++F    +L   S + +   ++   ++  
Sbjct: 374 TALPRHQTLRAMLDWSYDLLSANERLVFDRLAVFVGPFSLEAASHIAADDWIDPISVAAT 433

Query: 436 LGRLVDTSLLSLEPGPGLARYRLLNCVRSYA--LAQLRDPEQVARL 479
           L  L    L+++      A YRLL   R+YA    Q+R P +V  L
Sbjct: 434 LDELAAKGLVTVNRSSATASYRLLEMTRAYAREKLQVRGPSEVHAL 479