Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  155 bits (393), Expect = 8e-43
 Identities = 110/298 (36%), Positives = 155/298 (52%), Gaps = 11/298 (3%)

Query: 5   DLRRVDMNLLVIFEALMFEKNLTRVAEKLFMGQPAVSAALGRLRDLFDDPLLLRNGRGME 64
           D  R+D+NLLV  EAL+ E+N+TR A +L + QPAVSA L RLRDLFDDPLL+   RGM 
Sbjct: 2   DTSRLDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMT 61

Query: 65  PTPRAVAILKELQPAMDTISGAVSRAKDFDPSTSCAVFRIGLSDDAEFGLFPPLLSQLRE 124
           PT +AV +   L+ A+D +  A   A+DFDP+T+     I  SD  +  +  PL+  LR 
Sbjct: 62  PTVKAVELAGPLRAALDQLR-ATLEARDFDPATADLTVTIACSDYIQAAVVMPLVVALRA 120

Query: 125 EAPGIIVVVRRANYLLMSSLLASGEITVGVSYTTELPANAK-RKKLRDIPCKVLRGDDG- 182
            APG+ V VR     L+   LASGE    +  TT  P  A  R +       VL G  G 
Sbjct: 121 RAPGVRVAVRHLMPDLIEQQLASGE--TDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGH 178

Query: 183 ---AAPLTLDDYCERPHAMVSFS-GDLSGNIDLDLARIGRARRVVLAVPQFSGLRALLAG 238
                 L+++DY E  H +VS S G     +D  LA +G  R VV++   F  +  ++A 
Sbjct: 179 PRLRRGLSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAA 238

Query: 239 TQIIATVPDYAACALTEGTALRAEDPPFAIDAAELSMVWSGVHDNDPAERWLRARIGE 296
           + ++A VP            L   + P+  +  ++ ++W         +RWLRA I E
Sbjct: 239 SDVVALVP--RRLLRDPPARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWLRALIAE 294