Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  125 bits (313), Expect = 2e-33
 Identities = 92/307 (29%), Positives = 136/307 (44%), Gaps = 13/307 (4%)

Query: 1   MNRNDLRRVDMNLLVIFEALMFEKNLTRVAEKLFMGQPAVSAALGRLRDLFDDPLLLRNG 60
           M R  L  VD+NLL +  AL+ + N+T   E + + QPA+S AL R+R +  D L  +  
Sbjct: 1   MQRFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTS 60

Query: 61  RGMEPTPRAVAILKELQPAMDTISGAVSRAKDFDPSTSCAVFRIGLSDDAEFGLFPPLLS 120
           RG   T     I   ++  ++     + +   FDP+TS   FRIG++D     L P L+ 
Sbjct: 61  RGFVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVE 120

Query: 121 QLREEAPGIIVVV----------RRANYLLMSSLLASGEITVGVSYTTELPANAKRKKL- 169
           ++R EA   ++ V           R    ++   L  G I V V      PA  +   L 
Sbjct: 121 RVRSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLF 180

Query: 170 --RDIPCKVLRGDDGAAPLTLDDYCERPHAMVSFSGDLSGNIDLDLARIGRARRVVLAVP 227
             R +            PLTLD      H  V+ S    G ID  L  +G  RRVV  VP
Sbjct: 181 TERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVP 240

Query: 228 QFSGLRALLAGTQIIATVPDYAACALTEGTALRAEDPPFAIDAAELSMVWSGVHDNDPAE 287
            FS   A+++ + ++A +P+  A        L   + PF  +    SM+W    + DPA 
Sbjct: 241 HFSAAVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPAS 300

Query: 288 RWLRARI 294
            WLR +I
Sbjct: 301 LWLREQI 307