Pairwise Alignments

Query, 345 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 363 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 7/331 (2%)

Query: 11  DSRFIPGHYQPATLIDLALSRDIDSHRLLRGTGLFHEDILAGTARLSPQQFLGLIGNSRK 70
           + R  P H   A ++ L  S    +  LLRGTGL   ++L+ + ++S  Q   ++ N+  
Sbjct: 14  EDRCYPMHGTAACVMALTQS-GASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVA 72

Query: 71  LLDADDSSFLFGQRLLPGYYGAASHALGHAQNLHQALDILIQQQVLLSPLVTLQL-ELDE 129
           L    +++F  G+R+     G     +  A+   +  + +++ Q +L P+V     E+D 
Sbjct: 73  LSPGPEAAFEAGRRVSLASLGVWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDFHEVDA 132

Query: 130 HHAYLYW--LDSCGAGEHWRFLLEASMTSLVAMSQWLSGERLPWTA-SFSHAEPRYVEQY 186
           +  + Y   L S      ++  +E ++     MS+   G      A S  +  P +   Y
Sbjct: 133 NAWWTYTPLLVSDPRSTEYQMSMEFALCMGYRMSEIAFGPGFKALAISLRYDAPAHASLY 192

Query: 187 WVHLGEGTRFERPLDMLSIPREHLIRAWPGASATAGQVARQHAREQIEQLGFTSSFLDCL 246
               G    F +P D        L    P A+A +  + R      +++L         +
Sbjct: 193 EHFFGCPILFGQPHDGFHFDPALLECELPNANAISMAMVRAGCEVLLKKLSTRGGIEARV 252

Query: 247 YDYLREQVRQPPSL--EQAAHAFAMSPATLKRKLHKHATGFQQQVDRVRKQVALHLYQVK 304
            + L  Q  + P+L  ++ A+   M+P TL RKL +  T F+     V    A+   +  
Sbjct: 253 RELLSAQRPEKPALAVDEIANELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDT 312

Query: 305 GYSNDEVAAYLNFNDAANFRRSFKRWTGSTP 335
             + +E+AA L F+D +NFR++FKRWT   P
Sbjct: 313 DLTQEEIAARLGFSDGSNFRQAFKRWTNRQP 343