Pairwise Alignments

Query, 345 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 3/311 (0%)

Query: 33  IDSHRLLRGTGLFHEDILAGTARLSPQQFLGLIGNSRKLLDADDSSFLFGQRLLPGYYGA 92
           +D    L+   +   ++    AR++  QF  L  ++ + LD D++   F +RL  G YG 
Sbjct: 31  VDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELD-DEALGWFSRRLPWGSYGM 89

Query: 93  ASHALGHAQNLHQALDILIQQQVLLSPLVTLQLELDEHHAYLYWLDSCGAGEHWR-FLLE 151
              A   + +L  A+    +   LL+  + L LE+    A L   ++    + +R F L 
Sbjct: 90  LCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLRITENRPLDDAFREFCLV 149

Query: 152 ASMTSLVAMSQWLSGERLPW-TASFSHAEPRYVEQYWVHLGEGTRFERPLDMLSIPREHL 210
            S+  +     W    R+   +ASF  A P + + Y        RF+ P   +S    +L
Sbjct: 150 TSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMFTPEVRFDAPQAGISFDERYL 209

Query: 211 IRAWPGASATAGQVARQHAREQIEQLGFTSSFLDCLYDYLREQVRQPPSLEQAAHAFAMS 270
                        + ++     I Q          + + LR +  +  + E  A    +S
Sbjct: 210 ALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVRELLRSRASEATTAEALAGLLNVS 269

Query: 271 PATLKRKLHKHATGFQQQVDRVRKQVALHLYQVKGYSNDEVAAYLNFNDAANFRRSFKRW 330
             TL R+LH+  T  Q   + VR ++A+ L +       +VA  + F +  +F R+F +W
Sbjct: 270 GRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIKQVALAVGFRNEKSFSRAFLQW 329

Query: 331 TGSTPHLIRQL 341
           TG  P   RQL
Sbjct: 330 TGHAPRDFRQL 340