Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

 Score =  156 bits (395), Expect = 5e-43
 Identities = 104/302 (34%), Positives = 158/302 (52%), Gaps = 8/302 (2%)

Query: 11  LLGTALAFGLIGSSH-AADLQPLRVANQKSTIKALLEASGESENVPYDIRWAEFPSASPL 69
           LLG A +  L G+S  AA+   L V +Q  + + +LE SGE +++PY I +  F + SP+
Sbjct: 10  LLGLA-SLALSGTSAGAAEPLTLTVGDQFFSNRIVLELSGELKDLPYKIDFKRFNTGSPV 68

Query: 70  GEALNAGAVDIGALGDAPYVFALGAGASLKVVSIIHAEGRNTTALVVTRNSPIKTVADLK 129
             A+ +GA+D+G +GD P +     GA +KVV+       +   + +     I +VADL+
Sbjct: 69  ASAVASGALDVGIVGDTPVISLAANGAPVKVVASTQT---SLDGVGIVARKGIHSVADLR 125

Query: 130 GKKIVTGRGSIGHYLAIKALATAGLTTQDVQFIFLLPSESRLVLDNGTADAWATWDPYTT 189
           GK +    GS    LA KAL  AG+    V F +LLP+E+ L L  G  DA+ TW+PY +
Sbjct: 126 GKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGTWEPYVS 185

Query: 190 VVTSQSQARVLISGNK-LLSNHLYLAATRQAIADKRPQLDDFVARVDRAYAWANVHPHEY 248
           +   + +   LI   K L+S   Y+ A   A+A K   + DF+AR+ RA  W+N H  EY
Sbjct: 186 L--QEKEGSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQWSNTHVDEY 243

Query: 249 AAAQAKITGLPLDVHVEVAKDTHLTPVAIDDAVISGLQTTADTYQKEGLLLKHIDVSQGF 308
           A A +K      ++     K   +  + I   +IS  Q TAD      +L +  DV+  F
Sbjct: 244 AEAWSKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQMLKQRYDVAPLF 303

Query: 309 DK 310
           D+
Sbjct: 304 DR 305