Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 1e-36
 Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 11/312 (3%)

Query: 5   TPFKRLLLG---TALAFGLIGSSHAA--DLQPLRVANQKSTIKALLEASGESENV--PYD 57
           +P +RLL+G    ++A  L+  S A   D + LR+  QK     +L+ SG  E    P  
Sbjct: 9   SPLRRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQG 68

Query: 58  IR--WAEFPSASPLGEALNAGAVDIGALGDAPYVFALGAGASLKVVSIIHAEGRNTTALV 115
           ++  W EF +   L EAL+ GA+D+G   DAP VFA  AG  +  ++      R    LV
Sbjct: 69  VKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGI-GLV 127

Query: 116 VTRNSPIKTVADLKGKKIVTGRGSIGHYLAIKALATAGLTTQDVQFIFLL-PSESRLVLD 174
           V     + +V DLKGK++ TGRG    YL   AL  AGL+ +D+   ++   +++   L 
Sbjct: 128 VREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQ 187

Query: 175 NGTADAWATWDPYTTVVTSQSQARVLISGNKLLSNHLYLAATRQAIADKRPQLDDFVARV 234
           +G+  A   WDP+     SQ   + L  G+ L +N  +  +T       R  L  F A +
Sbjct: 188 SGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAEL 247

Query: 235 DRAYAWANVHPHEYAAAQAKITGLPLDVHVEVAKDTHLTPVAIDDAVISGLQTTADTYQK 294
            +   WAN  P E AA  A   G+   V    ++  +   VAI   +++  Q  ADT+Q 
Sbjct: 248 GKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQG 307

Query: 295 EGLLLKHIDVSQ 306
            GL+ + + V++
Sbjct: 308 LGLIPRKLQVAE 319