Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 4e-43
 Identities = 108/303 (35%), Positives = 151/303 (49%), Gaps = 12/303 (3%)

Query: 12  LGTALAFGLIGSSHAADLQPLRVANQKS-TIKALLEASGESEN----VPYDIRWAEFPSA 66
           LG AL    +  S A+  Q LR+  QKS T+  LL+A G  E         + W EFPS 
Sbjct: 9   LGLALLASALLPSLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGIRVTWHEFPSG 68

Query: 67  SPLGEALNAGAVDIGA-LGDAPYVFALGAGASLKVVSIIHAEGRNTTALVVTRNSPIKTV 125
            PL EALN G VD+ A + D   VF   AGA L   +   A      A++V  +SP+KT+
Sbjct: 69  LPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAR-EAPSPTAQAILVPADSPLKTL 127

Query: 126 ADLKGKKIVTGRGSIGHYLAIKALATAGLTTQDVQFIFLLPSESRLVLDNGTADAWATWD 185
           ADLKGK++   + +  HYL I+ALA AGLT +D+   +L+P++ R   +N   DAW TWD
Sbjct: 128 ADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKVDAWVTWD 187

Query: 186 PYTTVVTSQSQARVLISGNKLLSNHLYLAATRQAIADKRPQLDDFVARVDRAYAWANVHP 245
           PY      Q  AR+L+ G++L S   Y  A           L      +  A AW   +P
Sbjct: 188 PYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAGAWTKANP 247

Query: 246 HEYAAAQAKITGLPLDVHVEVA---KDTHLTPVAIDDAVISGLQTTADTYQKEGLLLKHI 302
              A     + G      V+ A   +   + PV +D+  ++  Q  AD + +EGLL K +
Sbjct: 248 EAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDN--LAEQQRIADAFYREGLLPKAV 305

Query: 303 DVS 305
           D S
Sbjct: 306 DTS 308