Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  160 bits (405), Expect = 4e-44
 Identities = 101/294 (34%), Positives = 154/294 (52%), Gaps = 6/294 (2%)

Query: 24  SHAADLQPLRVANQKSTIKALLEASGESENVPYDIRWAEFPSASPLGEALNAGAVDIGAL 83
           S AA  Q L V +Q    +A++EA+G  E +PY + W +F + SP+ EALN G++DIG L
Sbjct: 17  SLAAAAQTLVVGDQSYNARAVMEAAGVLEQLPYTLEWKQFTAGSPVAEALNVGSLDIGLL 76

Query: 84  GDAPYVFALGAGASLKVVSIIHAEGRNTTALVVTRNSPIKTVADLKGKKIVTGRGSIGHY 143
           GDAP +F    GA +KV++ +  +     A++  ++SPI ++ DL+GK+    +GS    
Sbjct: 77  GDAPPLFLGALGAPIKVIA-VSRQNLEGVAILARKDSPIHSLQDLRGKRAAIWKGSWSQQ 135

Query: 144 LAIKALATAGLTTQDVQFIFLLPSESRLVLDNGTADAWATWDPYTTVVTSQSQARVLISG 203
           L   AL  AG+    V+  +L   ++   LD G+ D  ATW+PY T    Q  ARVL + 
Sbjct: 136 LLFSALDKAGVPRDAVELRYLSALDASHALDGGSVDVIATWEPYVTQQERQG-ARVLATA 194

Query: 204 NKLLSNHLYLAATRQAIADKRPQLDDFVARVDRAYAW---ANVHPHEYAAAQAKITGLPL 260
           + ++    ++ A  +A+  KR Q+ DF+ R+ +A  W   A  +   YA A AK+T    
Sbjct: 195 DGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLSAPANTEAYADAWAKLTRADR 254

Query: 261 DVHVEVAKDTHLTPVAIDDAVISGLQTTADTYQKEGLLLKHIDVSQGFDKSFNA 314
           D+              +D  VI+  Q T D +   G L+K       FD SFNA
Sbjct: 255 DIARAWFARARTDLAPLDPQVIADAQKTVDFFSGLG-LIKAYPAQSLFDTSFNA 307