Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 34/276 (12%)

Query: 16  LAFGLIGSSHAADLQPLRVANQKSTIKAL---------------LEASGESENVPYDIRW 60
           LA  L G + +A+   + +  Q +TI                  L   G+ ++  Y + W
Sbjct: 10  LALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDATYQVEW 69

Query: 61  AEFPSASPLGEALNAGAVDIGALGDAPYVF----ALGAGASLKVVSI----IHAEGRNTT 112
             F S +PL   + AG +D GA+ D P  F     L AG     +S+    +H  G    
Sbjct: 70  KNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGSG---N 126

Query: 113 ALVVTRNSPIKTVADLKGKKIVTGRGSIGHYLAIKALATAGLTTQ-DVQFIFLLPSESRL 171
            +VV   S ++++A+LKGK I     S  H + ++A+A  G   Q DV+ I   P  +  
Sbjct: 127 GIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIAGS 186

Query: 172 VLDNGTADAWATWDPYTTVVTSQSQARVLISGNKLLSNHLYLAATRQAIADKRPQLDDFV 231
            L +   +A A + P+  +  ++  AR +  G +  +   + A      A K P++    
Sbjct: 187 ALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPEVVTAY 246

Query: 232 AR----VDRAYAWANVHPHEYAAAQAKITGLPLDVH 263
            R     DR  A     P +Y+    K+TG+  +V+
Sbjct: 247 LRASLEADRLIA---AQPEKYSELIEKVTGIEAEVN 279