Pairwise Alignments

Query, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 4e-52
 Identities = 112/308 (36%), Positives = 171/308 (55%), Gaps = 7/308 (2%)

Query: 9   RLLLGTALAFGLIGSSHAADLQPLRVANQKSTIKALLEASGESENVPYDIRWAEFPSASP 68
           RL L  AL+   + ++ A+    LRV +Q+   +A+++ASG  ++VPY + W+EF +A+P
Sbjct: 8   RLALSLALS---VAATVASAQDVLRVGDQRGNARAVMDASGVLKDVPYQVEWSEFANAAP 64

Query: 69  LGEALNAGAVDIGALGDAPYVFALGAGASLKVVSIIHAEGRNTTALVVTRNSPIKTVADL 128
           L EAL A A+D G++GDAP  FA   G   K +     EG    A++V  ++P + + DL
Sbjct: 65  LLEALAAEALDAGSVGDAPLTFAAARGVKAKAIFATKYEGN---AIIVKNDAPYQGIKDL 121

Query: 129 KGKKIVTGRGSIGHYLAIKALATAGLTTQDVQFIFLLPSESRLVLDNGTADAWATWDPYT 188
             KK+   +GS GH L +++L  AGL    +  +FL P+E+ L L NG+ DA + W+PY 
Sbjct: 122 VRKKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWEPYI 181

Query: 189 TVVTSQSQARVLISGNKLLSNHLYLAATRQAIADKRPQLDDFVARVDRAYAWANVHPHEY 248
           +  T +S AR+++ G K   +  Y  A+  AI  KR  L DFVAR  +A AW   HP EY
Sbjct: 182 SFATLKSGARIIVDG-KNYPSLSYFIASEAAIEGKRDILKDFVARSAKARAWGLEHPQEY 240

Query: 249 AAAQAKITGLPLDVHVEVAKDTHLTPVAIDDAVISGLQTTADTYQKEGLLLKHIDVSQGF 308
           +   A++  +P DV +         P  I+  V    Q+T D Y   G++ K +  S   
Sbjct: 241 SKIIAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLKASDLL 300

Query: 309 DKSFNAKR 316
           D SF+ K+
Sbjct: 301 DDSFSPKQ 308