Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 302 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 6/274 (2%)

Query: 1   MKIDDIDAFVEVIRCQSISHAAESLQLTQPAITRRVQNFEQALGVELFDRNTKPLKPTLI 60
           +KI  I AFVEV R  SI  A+  L ++QPA+++ +Q  E+ L  +LF R +K +  T  
Sbjct: 5   VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64

Query: 61  GTRVYEQCRLILREMDALRE-LVATDAPPTGLLRLGVPQTIGDVVLLDALKHLRTEYPDL 119
           G   Y+   LIL E+ A +E +        G + +G+  +I   ++   +     ++P +
Sbjct: 65  GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124

Query: 120 RAQVATGWGSQLVGKIERGELDAAAALFPAGKIFPDNIVGESIGKMELVVVCAKAQLPKK 179
           + ++  G    ++ ++ +GELD     +  G  +      E + + +  + C        
Sbjct: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGP-YDHEFTFEKLLEKQFAIFCRPGHPAIG 183

Query: 180 PCKLADVYQNGWILNPDGCGFRAGLQRTLSDQGLALRVNL--ETFGTELQLGLVADGLGL 237
              +  +    W +      +   L   L DQ    +V +  ETF     + LVA    L
Sbjct: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSA--CISLVAKSDFL 241

Query: 238 GLVPRPLLERSAHREQLAVMPLKDFKPVMDLWLI 271
             +P  +     H + L ++P+ +  P    +LI
Sbjct: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLI 275