Pairwise Alignments

Query, 438 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 from Escherichia coli BL21

 Score =  121 bits (303), Expect = 8e-32
 Identities = 102/320 (31%), Positives = 154/320 (48%), Gaps = 31/320 (9%)

Query: 76  AIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGSEDGNIKVVSPIDDTPASKA 135
           A+      +DPH+ YL P +  +     S    G+G  +  +D    + S +   PA+K+
Sbjct: 214 AMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKS 273

Query: 136 -GIQAGDFIVKIN--GQP---TRGQTMTEAVDKMRGKIGQKITLTLVR--DGGNPFDVTL 187
             I  GD IV +   G+P     G  + + V  ++G  G K+ L ++    G     VTL
Sbjct: 274 KAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTL 333

Query: 188 TRATILV--KSVKSQLLESG---YGYIRITQFQVKTGDEVAKALAKLRKDNGKKLNGIVL 242
           TR  I +  ++VK  +   G    G + I  F V   D+V   L KL K N   ++ +++
Sbjct: 334 TRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQN---VSSVII 390

Query: 243 DLRNNPGGVLQSAVEVVDHFITKGLIVYTKGRIANSELRF-SATGNDLSENVPLAVLING 301
           DLR+N GG L  AV +   FI  G IV  +    N ++R  S T   +    PL VL++ 
Sbjct: 391 DLRSNGGGALTEAVSLSGLFIPAGPIVQVRDN--NGKVREDSDTDGQVFYKGPLVVLVDR 448

Query: 302 GSASASEIVAGALQDQKRGVLMGTTSFGKGSVQTVLPLNN------------ERALKITT 349
            SASASEI A A+QD  R +++G  +FGKG+VQ    LN               +++ T 
Sbjct: 449 FSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI 508

Query: 350 ALYYTPNGRSIQAQGIVPDI 369
             +Y  NG S Q +G+ PDI
Sbjct: 509 QKFYRVNGGSTQRKGVTPDI 528