Pairwise Alignments

Query, 1027 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  781 bits (2017), Expect = 0.0
 Identities = 427/1011 (42%), Positives = 623/1011 (61%), Gaps = 8/1011 (0%)

Query: 3    GINLSELAVKHRAVTLFLIIAILAAGIFSFGKLGRAEDPSFTVKVMTITAAWPGATAQEM 62
            G NLS  A+++R + LFL+I + A G  S+ KLG++EDP FT K M I   WPGA+A+E+
Sbjct: 2    GFNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEV 61

Query: 63   QEQVADRLEKRLQELDYYDRVETIAQPGFVSMRMTYKESTRPSEIQDLFYQTRKKLSDEA 122
              QV +R+EK+L E   Y+R+ + ++PG   +    ++S    +I +L+YQ RKK++D  
Sbjct: 62   ARQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIR 121

Query: 123  AKLPQGVIGPFFNDEYSDVYFALYALEAEHLPHRQQVQMAEELRQGLLNLPGVKKVNILG 182
              LP  + GPFFNDE+   +  +YAL  E   +      A+ ++  L  +  V KV+++G
Sbjct: 122  HTLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIG 181

Query: 183  EQAQRVFVEFSYERLATLGIKPDQIFAALAAQNAVAPSGFVETAGARAYIRIDGAFDSLS 242
             Q ++V++E S  +LATLG+  + +  AL  QNAV+ +GF ET   R  +R+ G FDS+ 
Sbjct: 182  LQDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVE 241

Query: 243  LIENVPLEVNGRVLRIANVATVSRGYEDPPSYRIRHQGDPALMLGVIMEKHWNGLELDKS 302
             I   P+ V  R  RI +VA V RG+ DPP+ R+R  G+ A+ L V M+   + L L K+
Sbjct: 242  QIRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKA 301

Query: 303  LKAQEAKIQADLPLGVNFAKVSDQAKNIRLAVNEFMLKFFVALAVVMVISLLALGFRVGL 362
            L+ +  ++  +LP G+   KVSDQ   ++  V EF+     AL +V+++S  +LG R GL
Sbjct: 302  LEGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGL 361

Query: 363  VVAAAVPLTLSVVFVIMLLTGREFDRITLGALIISLGLLVDDAIIAIEMMVVKLEEGFDR 422
            VVA A+PL L++ F  M   G    +I+LGAL+++LGLLVDDAIIA+EMM +K+E+G+DR
Sbjct: 362  VVALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDR 421

Query: 423  IHAATFAWSSTAAPMLTGTLVTIIGFLPVGFARSGAGEYAGNIFWIVGFALISSWLVAVV 482
            + AA++AW+STA PMLTGTL+T  GFLP+  A S  GEY  +IF +V  AL++SW+ AVV
Sbjct: 422  LKAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVV 481

Query: 483  FTPYLGVKLLPQIKPV-------PGGHDAIYAGRYYQKLRSLVQACVRRRWLVTGLVVGA 535
            F PYLG +LLP +  +        G     YA  +YQ++R LV+ CVRRR  V  L + A
Sbjct: 482  FVPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAA 541

Query: 536  FVLCVAGMGVVKKQFFPNSDRSELILEVYMPPGSAFKSTEAVAARLEKALLQEPQTTLVD 595
            FV  +     V +QFFP S R EL++++ +  G++  +T     +LE  L Q+       
Sbjct: 542  FVGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYV 601

Query: 596  TYVGGGAPRFFLSLNPELPDPAFAKLIVQTPDSHARDALKLRMRERIAAGEFASARVRVT 655
             YVG G+PRF+L L+ +LP  +FA+ +V       R+ L+  +   +   +F   R RVT
Sbjct: 602  AYVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTVDQ-QFPDLRARVT 660

Query: 656  QLLFGPPVPFPVVFRVSGPNLDVLRGVSEDVRKVVAANTLTKDAFLDWGERTSGYRLVLD 715
            +L  GPPV +PV FRV+G +++  R ++ +V   V  N    +  LDW E +    L +D
Sbjct: 661  RLENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEID 720

Query: 716  QDRLRLLGFTPNEVKSQLNALLSGNPITEVREGNRTVSVVARAQGGQREDLGNLNNMTLT 775
            QDR R LG + + + S L + L G  +++ RE N  + ++ R    +R +L NL ++ L 
Sbjct: 721  QDRARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALP 780

Query: 776  NSAGTSVPLAQVGHFQAVMEEPILKRRNRATTVEVRADIIDGVQPPDVEMAVYKDLQPLI 835
               G SV L+QV   +   EE I+  RNR  TV VRADI D  QP  +   +   LQ + 
Sbjct: 781  TDNGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIR 840

Query: 836  AKLPAGYQIDIGGPVEESAKANVALAALFPIMILLTLTVIMFQVRSFGVMFMVFATAPLG 895
            AKLP GY +++GG VE+S +   ++ A  P+ I++ L+++M Q+RSF    MVF TAPLG
Sbjct: 841  AKLPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLG 900

Query: 896  LIGAVPTLLLFNQPFGFNAILGLIGIGGILMRNTLIFTDQIRQNQDHGMPIHAAIIEATV 955
            LIG    LL+F QPFGF A+LG I + G++MRN++I  DQI Q+   GM    AIIEATV
Sbjct: 901  LIGVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATV 960

Query: 956  RRARPVILTALAAALAFIPLTLSVFWSSLAYVLIGGVLVGTVLTLLFLPAL 1006
            RR RP++LTALAA LA IPL+ SVF+  +A  ++GG++V TVLTLLFLPAL
Sbjct: 961  RRFRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPAL 1011