Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 5e-41
 Identities = 98/268 (36%), Positives = 138/268 (51%), Gaps = 16/268 (5%)

Query: 16  WRDERLPFVEARTIADGRKVTYSRHAHEHFSIGVVTTGRSYYHYGAETFE-ISAGTVVLM 74
           WRD  L  VE+R     R   Y  H+H  FSIG V  GRS++   A+  + ++ GT+VL+
Sbjct: 9   WRDPALAHVESRRACHSR-ACYKAHSHPTFSIGAVDAGRSHFTGAADGQQHLAPGTLVLV 67

Query: 75  NPGDVHACNPIANEPWSYQMVYIDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGL 134
               VHACNP     WSYQM+++D  WLT L+ + G    +   P      R+  +Y   
Sbjct: 68  PAHRVHACNPAPGLAWSYQMLHVDADWLTQLRLESGLGGIEAGEPVRI--CREAEVYRQF 125

Query: 135 LELYGILVDEQAEHLQKQSSLVSYFTEVQQRLNP--SDTPVRE---VNHKLERAADYIRE 189
             L  +L        +K ++L+++  ++    +P  +  P  +   +N  L R      E
Sbjct: 126 CALNRLLFSSACNG-EKDAALIAFLGDLDFSAHPPLAAAPALQAATLNGLLARI-----E 179

Query: 190 HCTDA-LRLEDICVAAELSPSYLIRAFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADV 248
           H   A L LE +   A L    LIRAF+   G TPHA+L+N R+   R  L +G  +A+V
Sbjct: 180 HQDPAQLSLEVLAREAGLGRYQLIRAFRAATGFTPHAYLLNARVNRGRQLLSEGLALAEV 239

Query: 249 ALAAGFADQAHFQRTFKQHFAATPGQYR 276
           A   GFADQ+HFQR FK H   TPGQYR
Sbjct: 240 AYQLGFADQSHFQRVFKAHVGVTPGQYR 267