Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 1e-27
 Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 6/243 (2%)

Query: 37  YSRHAHEHFSIGVVTTG-RSYYHYGAETFEISAGTVVLMNPGDVHACNPIANEPWSYQMV 95
           ++ H HE +   V+ +G + ++H G+E      G++VL+NP ++H         W Y+  
Sbjct: 32  FAPHVHEGYVFTVIESGAQRFWHRGSEHLA-PVGSMVLINPDELHTGATAHEAGWRYRGF 90

Query: 96  YIDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGLLELYGILVDEQAEHLQKQSSL 155
           Y +   +T +  +L      G   F      D  L     +L+  L +  A  LQ+Q++ 
Sbjct: 91  YPEHERVTGVLDELELG-RHGMPSFKDSVIHDPALALAFSQLHQ-LSEASASALQQQTAW 148

Query: 156 VSYFTEVQQRLNPSDTPVREVNHKLE--RAADYIREHCTDALRLEDICVAAELSPSYLIR 213
                 + QR      P    +  L   RA + +     D   LE +  A  LSP +  R
Sbjct: 149 RQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAAAVNLSPFHFAR 208

Query: 214 AFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALAAGFADQAHFQRTFKQHFAATPG 273
            F+Q  GL PHA+L  +R+  AR  L+ G   + VA   GFADQ+H  R FKQ +  TPG
Sbjct: 209 VFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSRQFKQAYGVTPG 268

Query: 274 QYR 276
            YR
Sbjct: 269 AYR 271