Pairwise Alignments

Query, 200 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 215 a.a., DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) from Escherichia coli BW25113

 Score = 93.6 bits (231), Expect = 2e-24
 Identities = 62/202 (30%), Positives = 112/202 (55%), Gaps = 10/202 (4%)

Query: 4   RIIIADDHPMFREAMLRTVQRLLPDAVVQEAGDLDGVLALIHEGGEVDTLILDLRFPGLT 63
           +++I DDHP+ R  + + ++      VV EAGD    + L +   ++D ++LDL   G++
Sbjct: 8   QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRL-DIDVILLDLNMKGMS 66

Query: 64  CMSQLVELRQQLRRTTLIVVSMVDDPALIDQVMALGADGFIGKNIAPDEIGQALLAIREG 123
            +  L  LR+      +I++++ D  + +  ++  GADG++ K+  P+ + +A+ A  +G
Sbjct: 67  GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126

Query: 124 EVLVKFAPSGLL--------PLDTYA-LTARQQDVLRLIAQGKTNKEIAKALEISPFTVR 174
             +     +  L          D ++ LT R+ DVL  +AQG +NK+IA  L IS  TV+
Sbjct: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186

Query: 175 IHVSSLLRTLDVPSRAAAAVKY 196
           +H+ +LLR L+V SR AA + +
Sbjct: 187 VHIRNLLRKLNVRSRVAATILF 208