Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  164 bits (415), Expect = 9e-45
 Identities = 100/293 (34%), Positives = 160/293 (54%), Gaps = 8/293 (2%)

Query: 2   IENDQQVLVRALDAATNPVLITER-SGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQ 60
           +++ ++   +A  ++ + + ITER SG  + +N  FC ++GYS  E++G T + +     
Sbjct: 532 LKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWAD 591

Query: 61  STTFYRNLWMTIMAGLSWQGEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNFSL 120
                  L      G     EM+ R K G   TV   + P+   +  V   +    + S 
Sbjct: 592 DKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNE--VDCLLLTARDVSQ 649

Query: 121 IDEERAAMQQLAFHDALTGLPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFKSINDT 180
           +   +A ++ LA+HD LT LPNR L ++ L+Q I    ++    AL+F+DLDHFK IND+
Sbjct: 650 LKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDS 709

Query: 181 LGHACGDRLLVAVAERLGQSVRRSDVVARLSGDEFAILISGVDQI-----DQLEPLANKL 235
           LGH  GD +L  +  RL  SVR  D VARL GDEF +L+SG++       +++  LA+ L
Sbjct: 710 LGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTL 769

Query: 236 VAAIHQPFMVDNHRIETAISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGN 288
              + +P  +D  R++   SIG++L    G++  DLL +AD A+Y+AK +G N
Sbjct: 770 RELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRN 822



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 18  NPVLITER-SGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQSTTFYRNLWMTIMAGL 76
           +P+ +T + +G  + +N AF    G+S  +++G+T   +    +S    + +   I    
Sbjct: 423 DPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQA 482

Query: 77  SWQGEMVERRKDGG--TCTVNQIITPVLDQDGVVT 109
                +V   ++G   TC ++  +  V DQ   VT
Sbjct: 483 LSNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVT 517



 Score = 25.0 bits (53), Expect = 0.009
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 4   NDQQVLVRALDAATNPVLITER-SGSIVWLNKAFCLMSGYSKQELVGKT 51
           N ++        + N +L+T R  G I  +N+ F  M G+   +++GKT
Sbjct: 155 NSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKT 203