Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  194 bits (493), Expect = 5e-54
 Identities = 136/442 (30%), Positives = 206/442 (46%), Gaps = 49/442 (11%)

Query: 15  AAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDKEWGQAFMFNYQSGFTEGTVGLG 74
           AA    A GF++ +  +++ RN+Y N+D R+      KEWGQ F+  ++SG+T+GTVG G
Sbjct: 24  AADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSKEWGQGFLGIFESGYTQGTVGFG 83

Query: 75  LDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGKLRIAQTQLKAG 134
           LD     GL+LD  G     G D +    +   +GKA   FS  G T K+R   T+LKAG
Sbjct: 84  LDAHAMLGLKLDGGG-----GTDGSSILPYGSGNGKAPGSFSTAGGTLKMRAFDTELKAG 138

Query: 135 NLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNGQGLSIAGA 194
           +L    PV+     R+LPQTFRG  + +          G+       N S  + +  +  
Sbjct: 139 DLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRRIGTSYG 198

Query: 195 NDPVKGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGLVHNWQL-PVGQLKSD 253
             P +   S    + GV ++    L    Y A L++ + Q++  L + + +  +  L   
Sbjct: 199 ALP-EHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLDYTYVVNEMISLNPG 257

Query: 254 LRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSGHSLSLGYQ 313
           L Y+++   G++                      G +DN  +S  FT  +  HS++  YQ
Sbjct: 258 LHYYHTQDTGQS--------------------LLGDIDNNTYSLHFTVDVGHHSVTAAYQ 297

Query: 314 KTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLGVPGLRSSVTY 373
           +  G + F +I   QG S+YL  + Q   F    E++    YAY+F GLG+PGL S+V+Y
Sbjct: 298 RVNGNTPFDYI--AQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSY 355

Query: 374 IHGSHIRTV---------------GRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRG 418
           I G    T                G+D   WERD+ L YV+  G  K L    + A  RG
Sbjct: 356 ISGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRG 415

Query: 419 ND-----TADKDETRLIVSYSI 435
           ++       D DE R+IV Y I
Sbjct: 416 SNGYSAVDRDVDEYRVIVDYPI 437