Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 7e-53
 Identities = 139/461 (30%), Positives = 214/461 (46%), Gaps = 62/461 (13%)

Query: 6   CLALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAAS-----DKEWGQAFMF 60
           C AL  +  AAQ     GFI+ S  ++  RNFY+N+D R  +++       + W Q  + 
Sbjct: 13  CAALPFTAVAAQDPP-EGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGLIG 71

Query: 61  NYQSGFTEGTVGLGLDLQEWYGLRLDA-SGRAGKAGADNTPGSVFPLDDGKAVHD-FSKT 118
            ++SGFT+GTVG GLD     G++LD+ +GR+G  G+      V P+D      D +SK 
Sbjct: 72  RFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFG----VLPVDSSNHPEDNYSKV 127

Query: 119 GVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKI--- 175
           G   KLR+  T +KAG++ P  PV+   D R+LP++FRG   ++     ++L  G++   
Sbjct: 128 GGAAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGM 187

Query: 176 EQVMDRNSSNGQGLSIAGAND-PVKGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQ 234
            Q        G     AG  D P  G      Y+GG DY V+K L    Y + L++ + Q
Sbjct: 188 SQPAQSGMDKGFATFYAGPVDSPWIG------YFGG-DYTVNKNLSFSLYSSRLKDAWDQ 240

Query: 235 HFLGLVHNWQL-PVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNR 293
           ++ G    + L     L  D  Y+ +  +GK                       G  DN 
Sbjct: 241 YYFGSAARYPLNDEVSLFGDFNYYKAVDEGKK--------------------RLGAFDNN 280

Query: 294 LWSAMFTYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVG 353
           +WSA     +  HSL++ +Q+  G  DF ++ Q    S++L  + Q   F +  E++ + 
Sbjct: 281 IWSARLGVKVGAHSLAVSHQRNNGDDDFDYLRQSD--SIFLNNSIQYSDFNSPKERSWMV 338

Query: 354 SYAYDFAGLGVPGLRSSVTYIHGS----------HIRTVG-----RDNSEWERDLRLDYV 398
            Y  D    G+PGL     Y  GS          ++R  G      D   WERD+   YV
Sbjct: 339 RYDLDMQAFGIPGLSFMTRYGKGSGADYSNANAVYMRRDGAGNPLTDQRRWERDIEASYV 398

Query: 399 IPTGTLKGLGFTWRSAVLRGND-TADKDETRLIVSYSIPLM 438
           +  G LK L    R A +R +   +D +E R+IV Y I ++
Sbjct: 399 VQAGRLKDLSLRLRQATVRSSAFESDLEEVRVIVEYPIAVL 439