Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., porin from Pseudomonas simiae WCS417

 Score =  221 bits (563), Expect = 3e-62
 Identities = 146/447 (32%), Positives = 231/447 (51%), Gaps = 43/447 (9%)

Query: 2   NHKTCLALAVSLGAAQ-----QAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK--EW 54
           N  +C+ L + LG+          A GFI+D+KA+L+LRN Y+N++  N      K  EW
Sbjct: 7   NSSSCIGL-LGLGSLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTNPTNPQGKAEEW 65

Query: 55  GQAFMFNYQSGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHD 114
            Q F+ + +SG+T GTVG G+D+   Y  +LD  G  G  G    P       DG+   +
Sbjct: 66  TQNFILDAKSGYTTGTVGFGIDVLGLYSQKLD--GGKGTGGTQLLPIH----SDGRPADN 119

Query: 115 FSKTGVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGK 174
           F + GV  K ++++T+LK G  MP LP+L ++DGR LPQTFRG QV S +   + L  G+
Sbjct: 120 FGRLGVALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQ 179

Query: 175 IEQVMDRNSSNGQGLSIAGANDPVKGKASNQFYYGGVDYAVS-KRLQVQYYYASLENFYQ 233
                 RN ++ + + + G         S++F +GG +Y+ + KR QV  +YA L + YQ
Sbjct: 180 FRGNSPRNDASMEDMFMNGK----AAFTSDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQ 235

Query: 234 QHFLGLVHNWQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNR 293
           Q +  L H+  +    L ++L +F    DG                       AG +DN+
Sbjct: 236 QQYFNLTHSQPVGDWTLGANLGFFTGKEDG--------------------SALAGDLDNK 275

Query: 294 LWSAMFTYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVG 353
              A+ +   +G++  +G QK TG S +  +N   G +  L  +S +  + NA E++   
Sbjct: 276 TAFALLSAKYNGNTFYVGLQKLTGDSVWMRVNGTSGGT--LANDSYNASYDNAKEKSWQV 333

Query: 354 SYAYDFAGLGVPGLRSSVTYIHGSHIRTVG-RDNSEWERDLRLDYVIPTGTLKGLGFTWR 412
            + ++F  LG+PGL     YI GS++ T    D  EW R+  L Y + +G LK L   WR
Sbjct: 334 RHDFNFVVLGIPGLTLMNRYISGSNVHTGAITDGKEWGRESELAYTVQSGALKDLNVRWR 393

Query: 413 SAVLRGNDTADK-DETRLIVSYSIPLM 438
           ++ +R + + ++ DE RL +SY I L+
Sbjct: 394 NSTMRRDFSNNEFDENRLFISYPISLL 420