Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  176 bits (445), Expect = 2e-48
 Identities = 147/470 (31%), Positives = 209/470 (44%), Gaps = 63/470 (13%)

Query: 1   MNHKTCLALAVSLGAAQ---------QAAASGFIDDSKASLDLRNFYYNQDTRNAKAASD 51
           +   + LALAV  G +Q         QA + GFI+ S  +  LRN+Y N++ R    A +
Sbjct: 2   IKQSSLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRN-REGGRADN 60

Query: 52  KEWGQAFMFNYQSGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKA 111
            +W Q  M NY SGFT+GT+G G+D   + GL+LDA+     AG  N P        G  
Sbjct: 61  IDWTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDAT--HADAGTGNLPTD----RHGDP 114

Query: 112 VHDFSKTGVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLI 171
              +   G   K+++++TQLK G++ P  PV  T   RLLPQT  G+ + S +   ++L 
Sbjct: 115 EDAYGSVGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLE 174

Query: 172 AGKIEQVMDRNSSN-GQGLSIAGANDPVKGKASNQFYYGGVDYAVSKRLQVQYYYASLEN 230
           AG         +SN    +    AN      A+N   + G  Y  S  L    Y   LE+
Sbjct: 175 AGHFTSTNSGMTSNHDHDIYATYAN-----IAANSASFLGGKYTFSPSLSATVYAGELED 229

Query: 231 FYQQHFLGLVHNWQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKV 290
            ++Q++  L  N+ +P+   +S         DG        G              AG +
Sbjct: 230 IWRQYYTNL--NYVIPLVHDQS------LALDGNLYRTLDTG-----------SAKAGAI 270

Query: 291 DNRLWSAMFTYA-LSGHSLSLGYQKTTGQSDFPHINQGQ------GRSLYLITNSQSLKF 343
           +N  +S    Y+ L  H+L+L +QK  G + F +I  G       G S+YL  + Q   F
Sbjct: 271 NNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGDF 330

Query: 344 VNAGEQATVGSYAYDFAGLGVPGLRSSVTYIHGSHIR------------TVGRDNSEWER 391
              GEQ+    Y  + A  GVPGL     YI+GS I               G D +  E 
Sbjct: 331 NGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDHSAYAGDYGDDGAHHET 390

Query: 392 DLRLDYVIPTGTLKGLGFTWRSAVLRGN-DTADKD--ETRLIVSYSIPLM 438
           DL   YVI +G  K L    R A++  N D  D D  E RLIV Y   L+
Sbjct: 391 DLEAKYVIQSGPAKNLSLRVRDAIVAANADQRDGDLNELRLIVDYPFTLL 440