Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  245 bits (626), Expect = 2e-69
 Identities = 158/439 (35%), Positives = 240/439 (54%), Gaps = 40/439 (9%)

Query: 7   LALAV-SLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASD--KEWGQAFMFNYQ 63
           LA AV SL     A   GF++D+ A+L+LRNF++N++  N   A    +EW Q+F+ + +
Sbjct: 11  LATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSFILDAK 70

Query: 64  SGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLD-DGKAVHDFSKTGVTG 122
           SGFT+GTVG G+D+   Y L+LD  G  G  G       + PLD DG+   +F + GV  
Sbjct: 71  SGFTQGTVGFGVDVLGLYSLKLD--GGRGTGGTQ-----LLPLDHDGRPADEFGRLGVAF 123

Query: 123 KLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRN 182
           K RI++T++K G  MP LP+L ++DGR LPQT RG Q+ SK+   + L  G+      R+
Sbjct: 124 KARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRD 183

Query: 183 SSNGQGLSIAGANDPVKGKASNQFYYGGVDYAVS-KRLQVQYYYASLENFYQQHFLGLVH 241
            S+   LS+ G         S++F + G +YA + KR Q+  + A L++ Y Q F+ L+H
Sbjct: 184 DSSMNDLSMFGKT----AFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIH 239

Query: 242 NWQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTY 301
           +  L    L ++L +FY   DG                       AG++DN+ WS +F+ 
Sbjct: 240 SQPLGNWTLGANLGFFYGKDDG--------------------SARAGELDNKTWSGLFSA 279

Query: 302 ALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAG 361
              G++  LG QK TG S +  +N   G +  L  +S +  + NA E++    + Y+FA 
Sbjct: 280 KYGGNTFYLGLQKLTGNSAWMRVNGTSGGT--LANDSYNASYDNAQEKSWQVRHDYNFAA 337

Query: 362 LGVPGLRSSVTYIHGSHIRT-VGRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRGND 420
           LGVPGL     YI GS++ T    D  EW R+  L Y + +G+LK L    R++ +R + 
Sbjct: 338 LGVPGLTLMNRYISGSNVHTGTVTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDY 397

Query: 421 TADK-DETRLIVSYSIPLM 438
           + ++ DE RLIVSY I L+
Sbjct: 398 SNNEFDENRLIVSYPISLL 416