Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 450 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  319 bits (817), Expect = 1e-91
 Identities = 193/458 (42%), Positives = 263/458 (57%), Gaps = 40/458 (8%)

Query: 4   KTCLALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDKEWGQAFMFNYQ 63
           K  LA       AQQ  A GF+DDSKAS+  R  YY+ D R+   A  ++       ++Q
Sbjct: 8   KRILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQTLTGLRLDFQ 67

Query: 64  SGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGK 123
           SG+TEG VGLGLDLQ   G  L        A   NT   V    DG  V ++S+ G   +
Sbjct: 68  SGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPV--TTDGSPVDNWSRIGGNAR 125

Query: 124 LRIAQTQLKAGNLMP-KLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRN 182
            + ++T+LKAGN +   LPVL + DGRLLP +F+G  + S +F ++ L  G + + + R 
Sbjct: 126 FKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRA 185

Query: 183 SSNGQGLSIAGANDPVKGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGLVHN 242
           SSN  G+S  GA      K S+ F + G D+ V K L++QYYYA+LE++Y Q+FLGL+H+
Sbjct: 186 SSNWAGISGGGA------KGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHS 239

Query: 243 WQLPVGQ-LKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTY 301
           + + VGQ L +DLRYF S +DGKNG+ +      + +GY       GK+DN  WS  FTY
Sbjct: 240 FDMGVGQSLTTDLRYFKSDSDGKNGTDSRYA---LRNGYN----ENGKIDNTTWSLAFTY 292

Query: 302 ALSGHSLSLGYQKTTGQSDFPHIN-----QGQGR--------SLYLITNSQSLKFVNAGE 348
              GH+L+LG+Q+ + +S F  +N      G+GR        SLYL T+     F  AGE
Sbjct: 293 KAGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGE 352

Query: 349 QATVGSYAYDFAGLGVPGLRSSVTYIHGSHIR-----TVGRDNSEWERDLRLDYVIPTGT 403
            +T G Y+YDFA LGVPGL++  TY+ G  IR     T GR N EWE D RLDYV+ +GT
Sbjct: 353 NSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYN-EWESDYRLDYVLQSGT 411

Query: 404 LKGLGFTWRSAVLR----GNDTADKDETRLIVSYSIPL 437
            KGLGFT R  V R     +   D+D+ R  V+Y+  L
Sbjct: 412 FKGLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449