Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 2e-62
 Identities = 140/440 (31%), Positives = 214/440 (48%), Gaps = 47/440 (10%)

Query: 12  SLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK--EWGQAFMFNYQSGFTEG 69
           +L  A Q A + FI D   SL+LRNFY+++D     A   +  EW Q FM   QSG+T+G
Sbjct: 14  ALYCACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDG 73

Query: 70  TVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPL-DDGKAVHDFSKTGVTGKLRIAQ 128
            VG GLD     GL+LD+S        D +   + P   D +A  D++K   T K R+AQ
Sbjct: 74  VVGFGLDAAGMLGLKLDSS-------PDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQ 126

Query: 129 TQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNGQG 188
           ++LKAG L P+LP+L +   RL PQ F G Q+ SKD         +++    R+S++ + 
Sbjct: 127 SELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYED 186

Query: 189 LSIAGANDPVKGK-ASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGLVHNWQLPV 247
           L+             S++  Y GVDY     L +  + + LE+ +++ F G     +L  
Sbjct: 187 LTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGP 246

Query: 248 GQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSGHS 307
           G + ++ R+F +   G+                       G VDN+  S  F Y++ GH+
Sbjct: 247 GDVFTEWRWFNAREQGR--------------------ALLGGVDNQTLSTNFGYSVQGHT 286

Query: 308 LSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLGVPGL 367
            S GYQK  G + + ++    G   YL +  Q   F  A E+A +  Y Y+FA +G+PGL
Sbjct: 287 FSGGYQKVRGDTAYAYVG---GTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGL 343

Query: 368 RSSVTYIHGSHI------RTVGR-------DNSEWERDLRLDYVIPTGTLKGLGFTWRSA 414
             +V Y+ G  +         GR       +  EWER   + YV+ +G L+ +   WR+A
Sbjct: 344 TFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNA 403

Query: 415 VLRGNDTADKDETRLIVSYS 434
            +R N     DE R+IV Y+
Sbjct: 404 SMRSNFADAADENRVIVGYT 423