Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  236 bits (603), Expect = 8e-67
 Identities = 151/444 (34%), Positives = 234/444 (52%), Gaps = 42/444 (9%)

Query: 1   MNHKTCLALAVSL-GAAQQAAASGFIDDSKASLDLRNFYYNQDTRNA----KAASDKEWG 55
           MNH  C+AL ++L      AA  GF +DSKA+L  RN+Y+++D  +     K +  +EW 
Sbjct: 1   MNHTPCVALGLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWA 60

Query: 56  QAFMFNYQSGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLD-DGKAVHD 114
           Q F+ +++SG+T G VG G+D     G++LD+S        D T   + P+  DG+A  +
Sbjct: 61  QGFILDFKSGYTPGPVGFGVDALGLLGIKLDSS-------PDRTNTGLLPVHGDGRAADE 113

Query: 115 FSKTGVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGK 174
           +S+   T K R+++T+L+AG L P LPVLT  D RLLP T++G  + S +   + + AG 
Sbjct: 114 YSRLAPTFKARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGH 173

Query: 175 IEQVMDRNSSNGQGLSIAGANDPVKGKASNQFYYGGVDYAV-SKRLQVQYYYASLENFYQ 233
           ++    RN      ++    + P++   S+ F Y G DYA  + +  V  +Y  LE+ YQ
Sbjct: 174 LKSTHLRNEGGDGKMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQ 233

Query: 234 QHFLGLVHNWQLPVGQ--LKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVD 291
           Q F+GL H+   PVG   L ++L YF +   G                        G +D
Sbjct: 234 QGFVGLKHS--KPVGDWVLSANLGYFTAREQG--------------------DALLGNID 271

Query: 292 NRLWSAMFTYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQAT 351
           N+ + ++FT    GHS   GYQ   G S FP +         L     + +F    E++ 
Sbjct: 272 NQAFFSLFTARHGGHSFHAGYQGIYGDSPFPRVFANISP---LGNEVPTYEFAYTDERSY 328

Query: 352 VGSYAYDFAGLGVPGLRSSVTYIHGSHIRT-VGRDNSEWERDLRLDYVIPTGTLKGLGFT 410
              Y Y+FA +GVPGL ++V YI G+++ T +G +  + ERDL + Y + +G LKGLG  
Sbjct: 329 QVRYDYNFAAMGVPGLTATVRYITGNNVDTGLGYEGRDRERDLDIGYAVQSGALKGLGIR 388

Query: 411 WRSAVLRGNDTADKDETRLIVSYS 434
            R+A+ R N  +D DE RL + Y+
Sbjct: 389 VRNAMARSNYRSDIDENRLTLVYT 412