Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  299 bits (765), Expect = 1e-85
 Identities = 172/429 (40%), Positives = 244/429 (56%), Gaps = 43/429 (10%)

Query: 19  AAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK----------EWGQAFMFNYQSGFTE 68
           A A+GFI+DSK  L LRN Y+N++ R+ +  S +          EW Q F+ +YQSGFT+
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQ 80

Query: 69  GTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGKLRIAQ 128
           GT+GLG+D     G+RLD SGR G++G    P      DDG+A  +F+  G+T K R+  
Sbjct: 81  GTLGLGVDAMGLLGVRLD-SGR-GRSGTGLLPVH----DDGRAADEFASAGITAKARLGS 134

Query: 129 TQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNGQG 188
           T +K G L+PK PVL   D RLLPQT++G Q+ S D  ++ L AG +++   R+SS+  G
Sbjct: 135 TVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTG 194

Query: 189 LSIAGANDPVKGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGLVHNWQLPVG 248
           L + G   P    AS  F + G DYAVSK+L++ Y++  LE+FY+Q F GLVH+  L  G
Sbjct: 195 LYLDGYGGP----ASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPLGGG 250

Query: 249 QLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSGHSL 308
            L +DLRYF S   G                 YG     G +DN ++S   +YA SGH++
Sbjct: 251 VLTTDLRYFKSRDSGT---------------AYG-----GGIDNDMFSGQLSYAHSGHTV 290

Query: 309 SLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLGVPGLR 368
             GYQ   G++  P+I+   G ++Y  +N    KF+   E+  + SYAY+FA  GVPGL 
Sbjct: 291 GAGYQVLDGEAGLPYIS---GATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLT 347

Query: 369 SSVTYIHGSHIRTVGRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRGNDTADKDETR 428
               Y+ G + R+ G    EWERD  + YV+  G LKGLG   R+ V R +    +D  R
Sbjct: 348 FMTRYLSGDNGRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGRDSNR 407

Query: 429 LIVSYSIPL 437
           L ++Y I +
Sbjct: 408 LYLTYDIAI 416