Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  292 bits (747), Expect = 2e-83
 Identities = 161/439 (36%), Positives = 243/439 (55%), Gaps = 36/439 (8%)

Query: 5   TCLALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK---EWGQAFMFN 61
           + +A A++L      + + F +DS A+ + RN Y+N+D R+  +A      EW Q F+ N
Sbjct: 20  SAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFILN 79

Query: 62  YQSGFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPL-DDGKAVHDFSKTGV 120
           ++SG+T+GTVG GLD     G++LD+S        D T   + P  DDGKA  ++SK G+
Sbjct: 80  FESGYTDGTVGFGLDALGMLGIKLDSS-------PDRTDSGLLPTHDDGKAADEYSKLGL 132

Query: 121 TGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMD 180
           TGK++I+QT+LK G L+P+LP L   DGR+LPQTF G  + SK+ + +    G+I++  D
Sbjct: 133 TGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKD 192

Query: 181 RNSSNGQGLSIAGANDPVKGK-ASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGL 239
           RN +N + L++   N    G  +++    GG+DY  + R+   Y++A L++ Y+QHF+G+
Sbjct: 193 RNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGM 252

Query: 240 VHNWQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMF 299
           V       G L +DLR   S   G                       AG +DN   + M 
Sbjct: 253 VATQPWGPGTLGADLRLAMSDDAG--------------------AAKAGNIDNTTVNGML 292

Query: 300 TYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDF 359
           +YAL GH +S  +Q+ +G+S FP+++   G   YL+   Q   F  A E++    Y Y+F
Sbjct: 293 SYALGGHKVSAAWQQLSGESAFPYVD---GADPYLVNFVQINDFAGADERSWQARYDYNF 349

Query: 360 AGLGVPGLRSSVTYIHGSHI-RTVGRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRG 418
           A LGVPGL     YI G ++ R  G +  EWER+  L YV+ +G LK +    R+A  R 
Sbjct: 350 AALGVPGLTFMTRYISGDNVSRAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRS 409

Query: 419 NDTADKDETRLIVSYSIPL 437
           N   D DE RL+VSYS+ L
Sbjct: 410 NFARDADEVRLLVSYSVAL 428