Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  236 bits (601), Expect = 1e-66
 Identities = 155/439 (35%), Positives = 239/439 (54%), Gaps = 42/439 (9%)

Query: 7   LALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK--EWGQAFMFNYQS 64
           LA++ +L A   A   GFI+D+KA+L+LRNFY N++  +      K  EW Q+F+ + +S
Sbjct: 15  LAMSCALPAFA-ANEGGFIEDAKATLNLRNFYINRNFVDPAHPQGKAEEWTQSFILDARS 73

Query: 65  GFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLD-DGKAVHDFSKTGVTGK 123
           GFT+GTVG G+D+   Y ++LD     G  G  NT   + P+  DG+   DF + GV  K
Sbjct: 74  GFTQGTVGFGVDVLGLYSVKLD-----GGKGTTNT--HLLPVHGDGRPADDFGRLGVALK 126

Query: 124 LRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNS 183
            ++++T+LK G  MP LP+L ++DGR LPQTFRG Q+ S++   + L AG+      RN 
Sbjct: 127 AKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSPRND 186

Query: 184 SNGQGLSIAGANDPVKGKASNQFYYGGVDYAVS-KRLQVQYYYASLENFYQQHFLGLVHN 242
           ++ + +S+ G         S++F +GG +Y  + KR  +  + A L++ Y+Q +L L H+
Sbjct: 187 ASMEDMSLNGK----AAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHS 242

Query: 243 WQLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYA 302
             L    L ++L YF    DG                       AGK+DNR  SA+ +  
Sbjct: 243 QPLGDWTLGANLGYFIGKEDGAE--------------------RAGKLDNRTASALLSAR 282

Query: 303 LSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGL 362
             GH+  +G QK +G   +  +N   G +  L  +S +  F NA E++    + ++FA +
Sbjct: 283 YQGHTFYVGLQKVSGDDAWMRVNGTSGGT--LANDSYNSSFDNAKERSWQVRHDFNFATV 340

Query: 363 GVPGLRSSVTYIHGSHIRTVGR--DNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRGN- 419
           GVPGL     YI G ++ TVG   D  EW R+  L YV+ +G+ K L   WR++ +R + 
Sbjct: 341 GVPGLTLMNRYIKGDNV-TVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRDF 399

Query: 420 DTADKDETRLIVSYSIPLM 438
            T   DE RLIVSY + L+
Sbjct: 400 STNAFDENRLIVSYPLNLL 418