Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  224 bits (572), Expect = 3e-63
 Identities = 147/437 (33%), Positives = 224/437 (51%), Gaps = 41/437 (9%)

Query: 7   LALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAASDK--EWGQAFMFNYQS 64
           L   V  G    + A+GF++D KA+L LRNFY N++  N      K  EW Q+F+ + +S
Sbjct: 12  LGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARS 71

Query: 65  GFTEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGKL 124
           GFTEG +G G+D+   + ++LD  G  G  G    P      DDG+   D+ +  V GK 
Sbjct: 72  GFTEGPIGFGVDVLGLWSVKLDGGG--GTYGTALLPRH----DDGRPADDYGRLAVAGKA 125

Query: 125 RIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSS 184
           RI++T+LK G  MP LP+L ++DGR LPQTFRG QV S +   + L  G+      RN +
Sbjct: 126 RISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDA 185

Query: 185 NGQGLSIAGANDPVKGKASNQFYYGGVDYAVSK-RLQVQYYYASLENFYQQHFLGLVHNW 243
           + + +S  G         S++F + G +Y  ++ R QV  + A L++ YQQ +L L H+ 
Sbjct: 186 SMEDMSYGGG-------VSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQ 238

Query: 244 QLPVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYAL 303
            +    L ++L YF+   DG                       AG++DN+ +S MF+   
Sbjct: 239 PVGDWTLGANLGYFHGDEDGSE--------------------RAGQLDNKTYSGMFSAKY 278

Query: 304 SGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLG 363
            G +  +G QK  G + +  +N   G +  L  +S +  F NA E++    + ++F  +G
Sbjct: 279 GGSTFWVGLQKVDGDT-WMRVNGTSGGT--LANDSYNSSFDNANERSWQVRHDFNFVTVG 335

Query: 364 VPGLRSSVTYIHGSHIRTVG-RDNSEWERDLRLDYVIPTGTLKGLGFTWR-SAVLRGNDT 421
           VPGL     YI G  + + G  D  EW R+  L YVI +G  K L   WR S++ R    
Sbjct: 336 VPGLTLMNRYISGRDVHSGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSN 395

Query: 422 ADKDETRLIVSYSIPLM 438
            + DE RLI +Y + L+
Sbjct: 396 NEFDENRLIFNYPLSLL 412