Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  190 bits (482), Expect = 9e-53
 Identities = 132/464 (28%), Positives = 218/464 (46%), Gaps = 59/464 (12%)

Query: 5   TCLALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQDTRNAKAAS-----------DKE 53
           + L+ + ++ A  +    GFI+ S  ++  RNFY+N+D R++ A +            + 
Sbjct: 13  SALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEA 72

Query: 54  WGQAFMFNYQSGFTEGTVGLGLDLQEWYGLRLDAS-GRAGKAGADNTPGSVFPLDD-GKA 111
           W  A +  + SGFT+GTVG G+D     GL+LD   GR G   + +    V P+D+ G+A
Sbjct: 73  WAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFD----VLPVDNKGEA 128

Query: 112 VHDFSKTGVTGKLRIAQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLI 171
             +++K G   K+R+  T +K G++ P  PV+ + D RLLP++FRG  VE+   + + L 
Sbjct: 129 RDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQ 188

Query: 172 AGKIEQVMDRNSSNGQGLSIAGANDPVKGKASNQFYYGGVDYAVSKRLQVQYYYASLENF 231
            G++  +    SSN     +     PV    S    YGG DY+++    V  Y + L++ 
Sbjct: 189 GGRLHAMSQPVSSNLNDNFVTFYGGPVN---SPWIGYGGGDYSINDNWTVSVYASQLKDV 245

Query: 232 YQQHFLGLVHNWQLPVG-QLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKV 290
           + Q++ G    + L     L     Y+ +  +GK                       G+ 
Sbjct: 246 WNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKK--------------------RLGEF 285

Query: 291 DNRLWSAMFTYALSGHSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQA 350
           DN +WSA        H+L+L +Q+  G  DF ++ Q    S+++  + Q   F +  E++
Sbjct: 286 DNNIWSAKVGVRYGAHTLALSHQRNNGDDDFDYLRQSD--SIFVDNSIQYSDFNSPKERS 343

Query: 351 TVGSYAYDFAGLGVPGLRSSVTYIHGS----------HIRTVGRDN-----SEWERDLRL 395
            +  Y  +F   G+PGL     Y  GS          ++RT    N       WERD+ +
Sbjct: 344 WMLRYDLNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEV 403

Query: 396 DYVIPTGTLKGLGFTWRSAVLRGND-TADKDETRLIVSYSIPLM 438
            YV+ TG  K L F  R A  R     +D DETR+I+ Y + ++
Sbjct: 404 KYVVQTGPAKDLSFRLRQATTRATAFESDLDETRVIIEYPLSIL 447