Pairwise Alignments

Query, 416 a.a., major facilitator transporter from Pseudomonas simiae WCS417

Subject, 425 a.a., efflux transporter from Pseudomonas putida KT2440

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 34/344 (9%)

Query: 36  IKDLLQLNETQFGLLAATP--VLTGSLVRLPLGLL-----TDRFGGRIVFFVLMLACVLP 88
           ++ ++ L   +F + AA    VL+ S   L  GLL     +DR G + V  V  L C   
Sbjct: 61  VQPMMPLLSREFAINAAQSSLVLSVSTAMLAFGLLITGPISDRIGRKPVM-VFALVCAAL 119

Query: 89  LYLITYATAYWQF-LVLGLFVGLA-GGSFSVGIAYVAKWFDKENQGFAMGVFGAGNA-GA 145
             L +     W+  L     VGL+  G  +V + Y+++    ++ G AMG++  GNA G 
Sbjct: 120 STLASAVMPSWELVLATRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGG 179

Query: 146 AVTKFLAPALIALGTWHLVPKVFSAILFVTALLFWFLTRENKAHRSA---GGATLRQQLL 202
              + +   LI   +WH        +  V AL+FW +  E++  R+      + L   ++
Sbjct: 180 MSGRLITGVLIDFVSWHTAMLTIGGLALVAALVFWKVLPESRNFRAQTMNPRSLLDGFVM 239

Query: 203 CLKDPAV-WRYCQYYSIVFGGYVALALWMTKYYVQEYGFSLQSAALLAACFSLPGGVLRA 261
             KD  + W + + + ++ G +V L  ++    + E     Q+   L +   L G    A
Sbjct: 240 HFKDAGLPWLFLEAF-LLMGAFVTLFNYIGYRLLAEPYHMNQALVGLLSVVYLSGIYSSA 298

Query: 262 VGGWMSDRWGAHSVTWWVLWVSWICLFL-LSYPQTQLQVMTVNGPVYFHLGLNATLFTVL 320
             G ++D+ G   V W  + V  + L + L+ P     VM + G + F  G         
Sbjct: 299 QVGALADKLGRRKVFWASIVVMAVGLLMTLASP----LVMVIVGMLVFTFGFFGAHSVAS 354

Query: 321 LFVMGIAF-AFGKAS---VFKYIANDYPQNMGAVSGIVGLAGGL 360
            ++   A  A G+AS   +F Y A          S + G AGG+
Sbjct: 355 SWIGRRALKAKGQASSLYLFCYYAG---------SSVAGTAGGV 389



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 323 VMGIAFAFGKASVFKYIAND-YPQNMGAVSGIVGLAGGLGGFVLPILFGALVDLTGVRSS 381
           ++G++ +   A    Y++ + +PQ++G   G+      +GG    ++ G L+D     ++
Sbjct: 139 LVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTA 198

Query: 382 CFMLMYG---VVWVSLTWMYISEIR 403
             ML  G   +V   + W  + E R
Sbjct: 199 --MLTIGGLALVAALVFWKVLPESR 221