Pairwise Alignments

Query, 416 a.a., major facilitator transporter from Pseudomonas simiae WCS417

Subject, 390 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 22/269 (8%)

Query: 17  LAFTVCFMVWMMFAVLGVPIKDLLQLNETQFGLLAATPVLTGSLVRLPLGLLTDRFGGRI 76
           LA ++ F    M A L   + ++  + E   GL+    ++T  +  L  G+L+DRFG   
Sbjct: 15  LAASLIFFQAYMIAPLIPKLSEVFGVTEQYIGLVIPAYMITYGISILFYGVLSDRFGRMR 74

Query: 77  VFFVLMLACVLPLYLITYATAYWQFLVLGLFVGL-AGGSFSVGIAYVAKWFDKENQGFAM 135
           +    +LA +L   L   A    Q ++L LF GL A G   + +A V   ++   +G  +
Sbjct: 75  IIRFSLLAFILLTALTALAQTSSQLIMLRLFTGLGASGVIPMALALVGDLYEPHERGKPL 134

Query: 136 G-VFGAGNAGAAVTKFLAPALIALGTWHLVPKVFSAILFVTALLFWFLTRE---NKAHRS 191
           G +F A   G A+       L     W +   +F  I  + A++ WF++ +         
Sbjct: 135 GLLFAAMEGGMALGSTAGVVLEPFIGWRM---LFLGIAILGAIILWFISFQIDFKSQKPE 191

Query: 192 AGGATLRQ------QLLCLKDPAVWRYCQYYSIVFGG---YVALALWMTKYYVQEYGFSL 242
                +RQ       LL +      R  + YS VF     +  +  W+  Y+  +Y    
Sbjct: 192 LNKPNVRQVFSKFFHLLSMS-----RGAKTYSSVFWNGIFHSGIYTWLGYYFSVKYILGE 246

Query: 243 QSAALLAACFSLPGGVLRAVGGWMSDRWG 271
               L    + +PG +  +  G  +DRWG
Sbjct: 247 IGIGLAILGYGVPGFLFGSSIGRAADRWG 275



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 5/152 (3%)

Query: 205 KDPAVWRYCQYYSIVFGGYVALALWMTKYYVQEYGFSLQSAALLAACFSLPGGVLRAVGG 264
           +  A W      S++F     +A  + K   + +G + Q   L+   + +  G+     G
Sbjct: 6   RSKAFWLLALAASLIFFQAYMIAPLIPKLS-EVFGVTEQYIGLVIPAYMITYGISILFYG 64

Query: 265 WMSDRWGAHSVTWWVLWVSWICLFLLSYPQTQLQVMTVNGPVYFHLGLNATLFTVLLFVM 324
            +SDR+G   +  + L    +   L +  QT  Q++ +   ++  LG +  +   L  V 
Sbjct: 65  VLSDRFGRMRIIRFSLLAFILLTALTALAQTSSQLIMLR--LFTGLGASGVIPMALALVG 122

Query: 325 GI--AFAFGKASVFKYIANDYPQNMGAVSGIV 354
            +      GK     + A +    +G+ +G+V
Sbjct: 123 DLYEPHERGKPLGLLFAAMEGGMALGSTAGVV 154