Pairwise Alignments

Query, 539 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 550 a.a., aromatic acid chemoreceptor from Pseudomonas putida KT2440

 Score =  311 bits (796), Expect = 5e-89
 Identities = 192/432 (44%), Positives = 267/432 (61%), Gaps = 10/432 (2%)

Query: 113 LKTHREAYVAAFTQVQALIKQGAREQGLAQLKQQVMPAELAVFKSLDALMAMQGRLFAER 172
           L T  +A  A + +  A  ++  R++ L Q  +    A  A+ + L  L        +ER
Sbjct: 124 LATELQATFAEYAKAVAGQREATRQRSLEQYFKVNSDAGNAMGR-LQTLRQQLVTTLSER 182

Query: 173 EQAAQVLYDE--ARRNMIGLFLLCLALVVAAAI--IVTRSVIRPLGGEPDEAARVLSHIA 228
            Q   +  D   AR  ++ L LL + +V+A      + + V+ PL     EA      IA
Sbjct: 183 GQQIMLESDRRLARAQLLSLCLLGVTVVLAVLCWAFIAQRVLHPLR----EAGGHFRRIA 238

Query: 229 QGDLTIVVP-VGNSAEGSVMRNLHQMQQNLNQMVRHIATSVDGVASSSEELSAVSSQTSS 287
            GDL++ V   GN+  G +   L +MQQ+    +  I      + +++  L+AV+ ++++
Sbjct: 239 SGDLSVPVQGQGNNEIGQLFHELQRMQQSQRDTLGQINNCARQLDAAATALNAVTEESAN 298

Query: 288 SLQSQGQEIEQAATAVNEMTAAVDEVARNAVSTSEASRLSEQTAQRGRAQVQETVASINT 347
           +L+ QGQE+EQAATAV EMT AV+EVARNA++TS+ +  S Q A + R QV E +     
Sbjct: 299 NLRQQGQELEQAATAVTEMTTAVEEVARNAITTSQTTSESNQLAAQSRRQVSENIDGTEA 358

Query: 348 LATGVVETSERIQQLAGRVQDISSVLEVIRSIADQTNLLALNAAIEAARAGDAGRGFAVV 407
           +   +  +S  +QQL G+V+DI  VLEVIRS+++QTNLLALNAAIEAARAG+AGRGFAVV
Sbjct: 359 MTREIQTSSAHLQQLVGQVRDIGKVLEVIRSVSEQTNLLALNAAIEAARAGEAGRGFAVV 418

Query: 408 ADEVRALAHRTQASTQEIEQMIGNIRQDTEHAVAAMHSSSERVQATLSVAQRSGEALDEI 467
           ADEVR LA+RTQ STQEIEQMIG+++  TE AVA+M +S+ R Q+TL V   SG+ L+ I
Sbjct: 419 ADEVRTLAYRTQQSTQEIEQMIGSVQAGTEAAVASMQASTNRAQSTLDVTLASGQVLEGI 478

Query: 468 TRSISQINERNMMIASATEEQALVAREVDRNLVGIRNLSQQVLQGALHTETAGHDLAGMA 527
             +I +INERN++IASA EEQA VAREVDRNL+ IR LS     GA  T  A   L+G+ 
Sbjct: 479 YSAIGEINERNLVIASAAEEQAQVAREVDRNLLNIRELSNHSAAGAQQTSEASKALSGLV 538

Query: 528 GALHQTVARFKV 539
           G +   V RFKV
Sbjct: 539 GEMTALVGRFKV 550