Pairwise Alignments

Query, 261 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 255 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

 Score = 99.0 bits (245), Expect = 9e-26
 Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 6/237 (2%)

Query: 10  LPSLRKQKILLLLERDGKVTASELVDHFAVSQDTIRRDLGELAAAGLLQRVHGGALPRPK 69
           +P  R+Q IL ++   G V+ +EL D   VS  TIRRDL +L   G +  V GG     +
Sbjct: 2   IPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGR 61

Query: 70  ---DTGKDFFTRVGETNEAKRHLARLAADRVEEGQIVLFDSGSTTLQIAQSLPRSMRLTA 126
              +      T +  T +A   + +LAA  V+ G  +  D+G+TTL IAQ L     LT 
Sbjct: 62  VAHEPSHQVKTALAMTQKAA--IGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTV 119

Query: 127 VTTSPMIAIALADHPDVKVILTGGQLNPATLSTSGHETVRMIQGIKADVLFTGVCALHPQ 186
           VT   +IA  L D+ +  +I TGG +     S  G     M++ +  D  F    +   +
Sbjct: 120 VTNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVR 179

Query: 187 VGISSLHFDEVAVKQALLDSASHVVAVTMADKLGAVEPFVVAPCSRIHTLITEWHVP 243
            GIS+   D+V VK+A+  ++   V V  A K G V  ++  P S    +IT+  +P
Sbjct: 180 -GISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLP 235