Pairwise Alignments

Query, 470 a.a., DNA repair nucleotidyltransferase from Pseudomonas simiae WCS417

Subject, 472 a.a., conserved hypothetical protein from Agrobacterium fabrum C58

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 103/461 (22%), Positives = 178/461 (38%), Gaps = 31/461 (6%)

Query: 29  LLAGTPQRRVLQTVNDAARALGLRPGQSLTAAHALAKTFASAEYDPAEIERYQQFLAAWA 88
           ++A +  +R +   + AAR  G+  G     A AL +     + DPA      + +  WA
Sbjct: 1   MIARSGSKRWVSAADAAARQAGVHVGMPAAKAQALFRGLMLVDADPAMDAAALERITLWA 60

Query: 89  YQ-FSSQVSLYYPRALLFEIESSLGLFGPWPRFEARLRRELTELGFRHRIVAAPNPAAAR 147
              +S  V++     ++ + E +  L G       ++  +        R+  A    AA 
Sbjct: 61  LTLYSPIVAVDGIDGIVMDTEGADHLQGGELPMVTKIANQFLARKLTPRVAIADTWGAAH 120

Query: 148 VLANIY--DGLAVQDDGLMQALAPLPIDRAGLDPQAATALSRMGLRTLAQVQALPRHTLA 205
             A     + + V     ++A+  LPI    L     + L  +G +T+ ++   PR  L 
Sbjct: 121 ACARAISRETVIVPSGETVRAVEKLPISLLRLPGNVVSDLRTLGFQTVGELANTPRAPLT 180

Query: 206 RRFDAGLLKHLDALVGHRPLGLAFYQPPDRFDVRIELNFDVQSHQALLFPLRRLTGDLSA 265
            RF   + + LD + G     +   +  +  +V       + + + +   + RL   L  
Sbjct: 181 LRFGPEIGRRLDQMFGRACEPIDPIRTAELIEVSRAFAEPIGAAETIDKYVGRLVVQLIE 240

Query: 266 FLCGRDSGVQRFDLHLEHAQAPDSVIKVGLLSAEREPAMLFELARGRLEQVQVTSPVRGF 325
            L  R  GV+R DL +E        I+ G +   R+ A L +L R R E+++    +   
Sbjct: 241 ELQRRGLGVRRADLIVEKVDGVRQAIRAGTVKPVRDVAWLTKLFRDRTEKIEPGFGIEKL 300

Query: 326 RLVA-QDLPVFVPQR-QDLFDDRPQQTLPWEQLRERLRARLGDEAVQGLRFHADHRPECA 383
            LVA    P+   Q+   L +D      P   +      R+    V  +      R    
Sbjct: 301 TLVAVMAEPLEERQKSSSLVEDEVTDVTPLIDIYGNRGQRV--YRVAPVASDVPERSVQR 358

Query: 384 WQAAADKTLCPTLNNVQRPGWLLNEPTLL------------------GEQGVQILMGPER 425
              AAD      +++ +RP  LL  P L+                    + V+   GPER
Sbjct: 359 ISPAADPIEVTWVSHWRRPVRLLARPELIEAIALLPDRPPVSITWRGKRRKVKRADGPER 418

Query: 426 IESGWWD---GADIRRDYYLILTRAGQQGWAFRTVGQGDGL 463
           I   WW      +  RDY++I   AG++ W FR+   GDG+
Sbjct: 419 IFGEWWQRDAEMEAVRDYFVIEDEAGERLWVFRS---GDGI 456