Pairwise Alignments

Query, 1023 a.a., DNA polymerase from Pseudomonas simiae WCS417

Subject, 208 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score = 50.8 bits (120), Expect = 9e-11
 Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 16/193 (8%)

Query: 3   YAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLSGIVRAWQAAKAVELPLI 62
           +  LH  S +S         EL +R    G  A+A+TD   +   V+ ++A +   +  I
Sbjct: 5   FVHLHLHSEYSLADSTLRIGELVKRCVALGQPAVALTDLDNIFAAVKFYKACEGAGIKPI 64

Query: 63  IGSEVRIDNG----PKLVLLVEDLSGYQHLCRLITLA---RRRAEKGSYR--LLREDFDQ 113
           IG++V + +G     +L LL  D  GY  L RL++ A     R E    R   LRED D 
Sbjct: 65  IGADVHLADGNESASRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEWLREDNDG 124

Query: 114 --PLPG--LLALWVAEDSDTQADSQWL---RRTFGERLWLAVHLHCGQNDARHLEQRLQL 166
              L G   LA  +A  +  +    WL   +  FG+RL L +       +       LQ 
Sbjct: 125 LFALAGRNSLAARLAASNREELAHAWLVDWQGVFGDRLHLELTRTQRDGEDAFNAFALQA 184

Query: 167 AASLHLPAVACGD 179
           A+   LP VA  D
Sbjct: 185 ASKRGLPVVASND 197