Pairwise Alignments

Query, 1023 a.a., DNA polymerase from Pseudomonas simiae WCS417

Subject, 1117 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  908 bits (2346), Expect = 0.0
 Identities = 522/1086 (48%), Positives = 680/1086 (62%), Gaps = 68/1086 (6%)

Query: 3    YAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLSGIVRAWQAAKAVE---- 58
            YAELHCL+NFSFQRGAS+  E+ ERA + GY ALAITDEC+++GIVRA    + +E    
Sbjct: 35   YAELHCLTNFSFQRGASTPEEMVERAYQLGYKALAITDECSVAGIVRAHVCLRGMEHKLD 94

Query: 59   -----------------LPLIIGSEVRIDNGPKLVLLVEDLSGYQHLCRLITLARR-RAE 100
                               L+ GSE + +   +LV++  D  G+ +LC  IT AR     
Sbjct: 95   EYEREHPDEPKIPRNPTFRLLFGSEFQFERF-RLVVIANDTEGWGNLCEFITAARNTELP 153

Query: 101  KGSYRLLREDFD-QPLPGLLALWV-------AEDSDT-QADSQWLRRTFGERLWLAVHLH 151
            KG YR+  E+ D   L     L+V       A D  T   D    R  +GE LWLAV L 
Sbjct: 154  KGEYRVGWEESDVASLQHCQILFVPNRNPGGAMDKATLHEDLLAARALYGENLWLAVELF 213

Query: 152  CGQNDARHLEQRLQLAASLHLPAVACGDVHMHARGRRALQDTMTAIRHHVPVAEAGTRLH 211
               +D   L   +++     +P VA GDVHMHAR  + L D +TA+R    VAE G  L 
Sbjct: 214  NELDDDLWLVTLMEVGEQAGVPLVAAGDVHMHARSCKPLHDVLTAVREGKTVAECGFALQ 273

Query: 212  PNGERHLRSLDALAALYPQPLLDETETIARRCTFDLSQLR--YHYPHELVPAGHNAQSWL 269
             N +RHLR    LA ++ + +L+ T  +A RC FD   +R  Y YP E + +       L
Sbjct: 274  SNAQRHLRPRMRLAEIHLRRMLENTLAVAGRCNFDPEVIRENYKYPLETLGSDETPAQTL 333

Query: 270  RAVTEEGIAKRWPQGVDAKTAQQINSELELISELGYESYFLTVHDIVQFARSRSILCQGR 329
               T EG   R+P+G+  K   Q+  EL++I +L YE +FLTV +IV FARS+ ILCQGR
Sbjct: 334  VRKTWEGARGRYPEGIPDKVRAQVQKELDIIIDLKYEMFFLTVENIVSFARSQKILCQGR 393

Query: 330  GSAANSAVCYALGITEIDPSLTSMLFERFLSRERNEPPDIDVDFEHERREEVLQYVFQRY 389
            GS+ANSAVC+ LGIT IDP+   +LFERFLSRER+EPPDIDVDFEH+RREEV+QY++ +Y
Sbjct: 394  GSSANSAVCFCLGITAIDPTKGHLLFERFLSRERHEPPDIDVDFEHQRREEVIQYIYAKY 453

Query: 390  GRTRAALTAVVSSYHASGAVRDVAKALGLPPDQINALADCCGRWSDAAPPLDRLREG--- 446
            GR RAA+ AVV  Y +  A+RDV KA+G+    I+  A     W D     ++LR+    
Sbjct: 454  GRHRAAIAAVVICYRSRSALRDVGKAIGIDERLIDEFAKD-HYWFDDTVLGEQLRQAQAR 512

Query: 447  -GFDPDSPILRRVLTLTQQLIGFPRHLSQHPGGFVISEYPLDTLVPVENAAMAERTIIQW 505
             G   D   L   + +TQ+L GFPRHLSQH GGFV++   L  LVPVE A+M +R++IQW
Sbjct: 513  VGVVEDELKLVHWIEMTQKLKGFPRHLSQHVGGFVLTHTRLTRLVPVEKASMKDRSVIQW 572

Query: 506  DKDDLDAVGLLKVDILALGMLSAIRRCFDLLRRHRNRDLALATIPKEDPATYAMISKADT 565
            +KDDL+A+G+LKVD+LALGMLSAIRR  + + R R   + +  IP +D   + MI  ADT
Sbjct: 573  EKDDLEAMGMLKVDVLALGMLSAIRRGLEHMNRWRGSTIEMHQIPNDDQKVFDMICDADT 632

Query: 566  IGVFQIESRAQMSMLPRLKPQKFYDLVIEVAIVRPGPIQGGMVHPYLRRRNKEEE---TT 622
            IGVFQIESRAQMSMLPRLKP+ + DLVIEVAIVRPGPIQGGMVHPYL++R +  +     
Sbjct: 633  IGVFQIESRAQMSMLPRLKPRTYEDLVIEVAIVRPGPIQGGMVHPYLKQRERVRKGLPIH 692

Query: 623  YPSPELKVVLERTLGIPLFQEQVMQIAMVAADYGPGEADQLRRSMAAWKRHGGLEPHQER 682
            Y   EL+  LERTLGIP+FQEQVMQIAM+AA +   EADQLRR+MAAWKR GGL    ++
Sbjct: 693  YEKEELREALERTLGIPIFQEQVMQIAMIAAKFTADEADQLRRAMAAWKRKGGLGKFHDK 752

Query: 683  LRTGMLKNGYSEAFAAQIFEQIKGFGSYGFPESHAASFALLTYASCWLKCHEPAAFACAL 742
            L  GM  NGY  +FA  IF+Q+ GFG YGFPESHAASFALL   S WLK +EPA F  AL
Sbjct: 753  LVNGMTLNGYKASFAEAIFKQVMGFGDYGFPESHAASFALLVTVSSWLKNYEPACFLAAL 812

Query: 743  INSWPMGFYSPDQILQDARRHRLQIRPVDVQASDWDCSLEP----------IDGA----- 787
            ++S PMGFYSP Q++QDARRH +++RPVDV  SD+D +LE           ID       
Sbjct: 813  LDSQPMGFYSPSQLVQDARRHGVEVRPVDVTRSDFDTTLEAREPDAPRPSGIDERYADRL 872

Query: 788  ----QPAIRMGLRMISGFREEDARRIEAARHRRAFSDIADLDDRAGLDARAQALLADAGA 843
                QPA+R+GL  I+GF      R+  AR    F+   DL  RA L+ +  A LA A A
Sbjct: 873  GNENQPAVRLGLNRIAGFSAGGVERLLKARAAAPFTSTEDLALRAELEGKDMAALAAADA 932

Query: 844  LRALAGNRHKARWEVAGVHKQLGLFAGLPSPDEAVVELPSPTVGEDLHADYATVGTTLGP 903
            L +L+G+R +  W+     +   L  G+P  ++A++ LP+ + GE++  DYA++  TL  
Sbjct: 933  LMSLSGHRRQQVWDATAQRRAPALLRGVPINEQALL-LPAASEGEEIVGDYASLRLTLRR 991

Query: 904  HPLALLRAELRKRRCRSSQELMAVEHGRNVSVAGLVTGRQRPGTASGVTFVTLEDEFGNL 963
            HPLALLR  L + +  S+ EL +V +G+     G+V GRQRP TA+G  FVTLEDE GN+
Sbjct: 992  HPLALLRPRLARMKLMSAAELRSVPNGQTARACGIVKGRQRPQTANGTIFVTLEDETGNV 1051

Query: 964  NVVVWRDLAERQRQALVGSRLMKVDGRW----EAVGEVRHLIAGRLTDLTPLLEGI--TV 1017
            NV+VW  + E  R+ L+ S L+ V G W    E  G+V+HL+A    DLTPL+  +  + 
Sbjct: 1052 NVIVWSHVIEAWREPLLKSHLLAVQGTWQRDDETGGKVQHLVATGFKDLTPLMGRLAQSN 1111

Query: 1018 RSRDFH 1023
             SRDFH
Sbjct: 1112 TSRDFH 1117