Pairwise Alignments

Query, 1023 a.a., DNA polymerase from Pseudomonas simiae WCS417

Subject, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

 Score = 1472 bits (3812), Expect = 0.0
 Identities = 742/1021 (72%), Positives = 834/1021 (81%)

Query: 3    YAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLSGIVRAWQAAKAVELPLI 62
            YAELHCLSNFSFQRGASSA ELF RA+ QGY ALAITDECTL+GIVRAWQAAK  +L LI
Sbjct: 13   YAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLRLI 72

Query: 63   IGSEVRIDNGPKLVLLVEDLSGYQHLCRLITLARRRAEKGSYRLLREDFDQPLPGLLALW 122
            +GSEV++ +GPKLVLLVE+L+GYQ+LC LIT ARRRAEKG+Y+L R+D      GLLALW
Sbjct: 73   VGSEVQLCDGPKLVLLVENLTGYQNLCALITRARRRAEKGAYQLFRDDLLLHHQGLLALW 132

Query: 123  VAEDSDTQADSQWLRRTFGERLWLAVHLHCGQNDARHLEQRLQLAASLHLPAVACGDVHM 182
            VA DS   A   WLR  F ERLWLAVHLH G +DA  L++   LAA + + AVACGDVHM
Sbjct: 133  VAADSGDTATGAWLRSVFAERLWLAVHLHRGSDDAVRLQRLRALAADVGIRAVACGDVHM 192

Query: 183  HARGRRALQDTMTAIRHHVPVAEAGTRLHPNGERHLRSLDALAALYPQPLLDETETIARR 242
            H RGRRALQD MTAIR H  V+EAG  L  NGERHLRS   LA LYP  LL ET  IARR
Sbjct: 193  HVRGRRALQDCMTAIRQHCQVSEAGRFLFANGERHLRSQAQLAELYPLDLLAETLVIARR 252

Query: 243  CTFDLSQLRYHYPHELVPAGHNAQSWLRAVTEEGIAKRWPQGVDAKTAQQINSELELISE 302
            C FDLS+L Y YP ELVP GH   SWLR + E+G+  RWP G   K    +  EL LI E
Sbjct: 253  CQFDLSELNYQYPRELVPEGHTPASWLRELCEQGMPLRWPDGPSGKVRDVLAKELGLIEE 312

Query: 303  LGYESYFLTVHDIVQFARSRSILCQGRGSAANSAVCYALGITEIDPSLTSMLFERFLSRE 362
            LGYESYFLTVHDIV FARS+ ILCQGRGSAANS VC+ LGITE+DP    +LFERFLSRE
Sbjct: 313  LGYESYFLTVHDIVAFARSQRILCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRE 372

Query: 363  RNEPPDIDVDFEHERREEVLQYVFQRYGRTRAALTAVVSSYHASGAVRDVAKALGLPPDQ 422
            RNEPPDIDVDFEH+RREEV+QYVF+RYGR RAALTAVV++YHA+GAVRDVA+ALGLP DQ
Sbjct: 373  RNEPPDIDVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQ 432

Query: 423  INALADCCGRWSDAAPPLDRLREGGFDPDSPILRRVLTLTQQLIGFPRHLSQHPGGFVIS 482
            ++ALA CCGRWSD  P   RL E GF+  SP LRRVL L  +LIGFPRHLSQHPGGFVIS
Sbjct: 433  VDALAKCCGRWSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPGGFVIS 492

Query: 483  EYPLDTLVPVENAAMAERTIIQWDKDDLDAVGLLKVDILALGMLSAIRRCFDLLRRHRNR 542
            + PLD LVPVENAAM ERT+IQWDKDDLD VGLLKVD+LALGMLSA+RRCFD L+ HR R
Sbjct: 493  QQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGR 552

Query: 543  DLALATIPKEDPATYAMISKADTIGVFQIESRAQMSMLPRLKPQKFYDLVIEVAIVRPGP 602
             L LATIP EDPATYAMIS+A+T+GVFQIESRAQM+MLPRL+PQKFYDLVIEVAIVRPGP
Sbjct: 553  HLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGP 612

Query: 603  IQGGMVHPYLRRRNKEEETTYPSPELKVVLERTLGIPLFQEQVMQIAMVAADYGPGEADQ 662
            IQG MVHPYLRRR K+E  TYPSP+LK V ERTLG+PLFQEQVM++AMVAADY PGEADQ
Sbjct: 613  IQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQ 672

Query: 663  LRRSMAAWKRHGGLEPHQERLRTGMLKNGYSEAFAAQIFEQIKGFGSYGFPESHAASFAL 722
            LRRSMAAWKRHGGLEPH+ERL  GML+NGY+ AFA +IFEQIKGFGSYGFPESHAASFAL
Sbjct: 673  LRRSMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHAASFAL 732

Query: 723  LTYASCWLKCHEPAAFACALINSWPMGFYSPDQILQDARRHRLQIRPVDVQASDWDCSLE 782
            L YAS WLKCHEPA F CAL+NSWPMGFYSPDQ+LQ+ARR  +++RPVDV  SDWDC+LE
Sbjct: 733  LCYASSWLKCHEPAIFTCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDWDCTLE 792

Query: 783  PIDGAQPAIRMGLRMISGFREEDARRIEAARHRRAFSDIADLDDRAGLDARAQALLADAG 842
            P      AIRMGLR++ G  E DA+R++ AR +R + ++ DL  RAGLDARA+A LAD G
Sbjct: 793  PDAEGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVEDLCLRAGLDARARARLADGG 852

Query: 843  ALRALAGNRHKARWEVAGVHKQLGLFAGLPSPDEAVVELPSPTVGEDLHADYATVGTTLG 902
            ALRALA +RH+ARW+VA V  QL LFA + +  E  V+LP PTVGEDL ADY T+GTTLG
Sbjct: 853  ALRALASDRHQARWQVAAVQPQLPLFADVQALPEEPVQLPVPTVGEDLMADYQTLGTTLG 912

Query: 903  PHPLALLRAELRKRRCRSSQELMAVEHGRNVSVAGLVTGRQRPGTASGVTFVTLEDEFGN 962
            PHPLALLRA LR   CRSS EL  VEHG N++VAGLV GRQRP TASGVTFVTLEDE G 
Sbjct: 913  PHPLALLRARLRALGCRSSSELQGVEHGDNIAVAGLVVGRQRPQTASGVTFVTLEDEHGM 972

Query: 963  LNVVVWRDLAERQRQALVGSRLMKVDGRWEAVGEVRHLIAGRLTDLTPLLEGITVRSRDF 1022
            +NVVVWR LAERQR+ALVGS+L+KV GR E    VRHLIA RL D++PLL+G+ VRSRDF
Sbjct: 973  VNVVVWRALAERQRRALVGSQLLKVSGRLEQENGVRHLIARRLEDVSPLLQGLDVRSRDF 1032

Query: 1023 H 1023
            H
Sbjct: 1033 H 1033