Pairwise Alignments

Query, 1023 a.a., DNA polymerase from Pseudomonas simiae WCS417

Subject, 1428 a.a., DNA-directed DNA polymerase III (polc) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  293 bits (749), Expect = 8e-83
 Identities = 254/1058 (24%), Positives = 459/1058 (43%), Gaps = 107/1058 (10%)

Query: 3    YAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLSGIVRAWQAAKAVELPLI 62
            ++ LH  + +S  +  S    +  RAK     A+A+TD   +       +AA   ++  +
Sbjct: 245  FSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKAAMDNDIKPV 304

Query: 63   IGSEVRI----------DNGPKLVLLVEDLSGYQHLCRLITLARRRAEKGSYRLLREDFD 112
            +G E  I          D+G + VLL ++ +GY +L +L + A  +      R+ +E   
Sbjct: 305  VGCEFNICRDHQNKSQKDDGFQAVLLAKNKTGYHNLAKLASFAYTQGFYYVPRIDKELLV 364

Query: 113  QPLPGLLA----LW------VAEDSDTQADSQ--WLRRTFGERLWLAVHLHCGQNDARHL 160
            Q    ++A    LW      +    +TQA+    W +  FGE  ++ ++ H    + +  
Sbjct: 365  QYKGDIIATTGGLWGEVPFLILNVGETQAEEAFVWWKEQFGEDFYVELNRHGIPEEEKVN 424

Query: 161  EQRLQLAASLHLPAVACGDVHMHARGRRALQDTMTAIRHHVPVAEAGTRL---------- 210
            E  L+ A    +   A  + + + +      D +  ++    V +    +          
Sbjct: 425  EVLLRFAQKYDVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDKPKRYIGKKGREFRYG 484

Query: 211  HPNGERHLRSLDALAALY---PQPLLDETETIARRCTFDLSQL----------RYHYPHE 257
             PN E ++++ + +  L+   P+ +    E I +   + L++           ++  P +
Sbjct: 485  FPNEEFYIKTPEEMKKLFADLPEAIECTNEIIEKVEPYKLAREVLLPKFNIPEQFQDPQD 544

Query: 258  LVPAGHNAQS-WLRAVTEEGIAKRWPQGVDAKTAQQINSELELISELGYESYFLTVHDIV 316
                G   ++ +LR +T EG  +R+P+ +  +  ++++ EL +I+  GY  YFL V D  
Sbjct: 545  DEDGGKRGENAYLRHLTYEGAKRRYPE-ITEEIRERLDFELSIIANTGYPGYFLIVQDFT 603

Query: 317  QFARSRSI-LCQGRGSAANSAVCYALGITEIDPSLTSMLFERFLSRERNEPPDIDVDFEH 375
              AR   + +  GRGSAA SAV Y +GIT +DP    +LFERFL+ +R   PDID+DF+ 
Sbjct: 604  TAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPVAYDLLFERFLNPDRVSLPDIDIDFDD 663

Query: 376  ERREEVLQYVFQRYGRTRAALTAVVSSYHASGAVRDVAKALGLPPDQINALADCC----- 430
              R++V+ YV ++YG  + A      +  A  A+RD A+AL LP    + LA        
Sbjct: 664  HGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSDADRLAKLVPDIKL 723

Query: 431  ----GRWSDAAPPLDRLREGGFDPDSPI-----------LRRVLTLTQQLIGFPRHLSQH 475
                G  +D     ++L+    + D              L + +   + L G  R+   H
Sbjct: 724  KALFGLANDRGKLAEKLKNNSENIDKAYELINISKGNDDLSKTINQAKILEGSVRNTGIH 783

Query: 476  PGGFVISEYPLDTLVPVENAAMAERTIIQWDKDDLDAVGLLKVDILALGMLSAIRRCFDL 535
              G +I+   +   VPV  A  ++    Q+D   ++  GLLK+D L L  L+ I+    +
Sbjct: 784  ACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDFLGLKTLTLIKDAVRI 843

Query: 536  LRRHRNRDLALATIPKEDPATYAMISKADTIGVFQIESRAQMSMLPRLKPQKFYDLVIEV 595
            ++     +L     P +D  TY +  + +T+G+FQ ES      +  LKP  F DL+   
Sbjct: 844  VKERHGIELDPENFPIDDKETYELFQRGETVGIFQYESPGMQKYMRELKPTVFADLIAMN 903

Query: 596  AIVRPGPIQGGMVHPYLRRRNKEEETTYPSPELKVVLERTLGIPLFQEQVMQIAMVAADY 655
            A+ RPGP++   +  +++R++  E   Y   +++  L+ T GI ++QEQVM ++   A +
Sbjct: 904  ALYRPGPLE--YIPSFIKRKHGLEPIAYDLDDMEEYLQETYGITVYQEQVMLLSQKLAGF 961

Query: 656  GPGEADQLRRSMAAWKRHGGLEPHQERLRTGMLKNGYSEAFAAQIFEQIKGFGSYGFPES 715
              GEAD LR++M   K    L+  + +      + G+ +A   +I++  + F SY F +S
Sbjct: 962  TKGEADVLRKAMGK-KLRDVLDKMKPKFVNQAAEKGHDKAKLEKIWKDWEAFASYAFNKS 1020

Query: 716  HAASFALLTYASCWLKCHEPAAFACALINSWPMGFYSPDQILQDARRHRLQIRPVDVQAS 775
            H+  +A + Y + +LK H PA +  +++++           +++ +R  +++   DV  S
Sbjct: 1021 HSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIEVLGPDVNES 1080

Query: 776  DWDCSLEPIDGAQPAIRMGLRMISGFREEDARR-IEAARHRRAFSDIADLDDRAGL---D 831
                ++      +  IR GL  I G         IE       +  I D   R  L   +
Sbjct: 1081 KDGFTV----NQEGQIRFGLAAIKGAGGAAVHSVIEERAENGPYKSIFDFTQRVNLRSVN 1136

Query: 832  ARAQALLADAGALRALAGNRHKARWEV--------------------AGVHKQLGLF--- 868
             +    LA AG       +  +   E                          Q+ LF   
Sbjct: 1137 KKTLESLAMAGGFDCFPDHHRRQYLEAPENDATLIEKAVKYAQKKAQEAESSQVSLFGGG 1196

Query: 869  AGLPSPDEAVVELPSPTVGEDLHADYATVGTTLGPHPLALLRAELRKRRCRSSQELM--- 925
            +G+  P  ++  +   +  + L+ +   VG  +  HPL   + E          E     
Sbjct: 1197 SGMEVPMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEFDSFTNTPLSEFANTE 1256

Query: 926  AVEHGRNVSVAGLVTGRQRPGTASGVTF--VTLEDEFG 961
            A++    +  AG+VT      T +G  F  +TLED  G
Sbjct: 1257 ALKTKGEIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNG 1294