Pairwise Alignments

Query, 570 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 741 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  280 bits (716), Expect = 1e-79
 Identities = 161/425 (37%), Positives = 247/425 (58%), Gaps = 10/425 (2%)

Query: 149 LAIVVETTELVKSEQVR-----QELTHNLEQRVAAEVQARSAAEDQLRQSQKLEAIGGLT 203
           + I VE+   V++E+ R     + L   LEQRVA        AE++LRQSQK+EA+G LT
Sbjct: 315 VVIDVESRRSVEAERDRATAALRALNETLEQRVAERTVELIQAEEKLRQSQKMEAVGQLT 374

Query: 204 GGVAHDFNNLLQVIAGNLHLLARHEPDNA--QVQRRVAAAIAAVERGSKLSSQLLAFARR 261
           GG+AHDFNNLL  I+G L L           +V + ++ A  A +R + L+ +LLAF+RR
Sbjct: 375 GGLAHDFNNLLAGISGALELTGLRIAQGRWQEVDKYISTAQGAAKRAAALTHRLLAFSRR 434

Query: 262 QPLSPAVYNPQRIYAGLGELLQRALGETIHIDVQLPQDSWFINVDRNQLENALLNLAINA 321
           Q L P   +   +  G+GEL+QR +G +I +D       W   VD +QLENALLNL INA
Sbjct: 435 QTLDPRPTDVNVLMEGMGELIQRTVGPSITVDTLGASGVWPTLVDASQLENALLNLCINA 494

Query: 322 RDAMNGEGVIRITGENIILNPDDCAGKGIKPGEYVRLAVIDTGVGMSESTLKRAFEPFFT 381
           RDAM   G IRI   N+ ++    +   +  GEY+ L V DTG GM+   + +AF+PFFT
Sbjct: 495 RDAMPHGGRIRIETANVCVDAATASAHDLTEGEYLTLTVSDTGTGMTPEIMAKAFDPFFT 554

Query: 382 TKREGHGTGLGLSMVFGFVRQSGGHVEMWSEEGKGSVVQMYFP-HSLEPESLDVHIDQLP 440
           TK  G GTGLGLSM++GF +QSGG   + S+ G+G+ + +Y P +  +    D  +D   
Sbjct: 555 TKPIGQGTGLGLSMIYGFAKQSGGQARIASQVGRGTAISLYLPRYQGQAIEADPELDSTS 614

Query: 441 LSSGQ--ETILVVEDNEGVRLTVVELLEQSGYTVLTADDGDQAMLKLQAGLQPELIFTDV 498
            +  +  ETIL+V+D   VR  ++++L    Y+++ A D    +  L++ +  +L+ TDV
Sbjct: 615 ATPAERGETILIVDDEPSVRTLLMDVLGGLDYSLIEASDSITGLKILRSDVHIDLLITDV 674

Query: 499 VMPGRVKSTDLANWARAQNPPVAVLFTSGHTRDILSSNHLLSADIHLLSKPYSPEALTQR 558
            +PG +    +A+  R   P +  LF +G+    +  ++ L   + +L+KP++ + LT R
Sbjct: 675 GLPGGMNGRQMADAGREVRPALKTLFITGYAESTIIGDNSLGPGMQVLTKPFAIDTLTAR 734

Query: 559 VRSVL 563
           VR ++
Sbjct: 735 VRELI 739