Pairwise Alignments

Query, 570 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  265 bits (676), Expect = 6e-75
 Identities = 155/401 (38%), Positives = 233/401 (58%), Gaps = 9/401 (2%)

Query: 170 HNLEQRVAAEVQARSAAEDQLRQSQKLEAIGGLTGGVAHDFNNLLQVIAGNLHLLARHEP 229
           +++ +RV  E +  + AE  LRQ+QK+EA+G L+GG+AHDFNNLL  I G   L+ R   
Sbjct: 288 YDISERVQ-EQERLAKAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELM-RQRL 345

Query: 230 DNAQVQRR---VAAAIAAVERGSKLSSQLLAFARRQPLSPAVYNPQRIYAGLGELLQRAL 286
           D ++       +  + +A +R S L  +LLAF+R+Q L P       + AG+ +LL+R +
Sbjct: 346 DQSRFDALAPLLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGMEDLLRRTI 405

Query: 287 GETIHIDVQLPQDSWFINVDRNQLENALLNLAINARDAMNGEGVIRITGENIILNPDDCA 346
           G  I +  +     W   +D  QLE+ALLNL INARDAM   GVI I G+N++L+ +   
Sbjct: 406 GPAITLSSRFASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQAV 465

Query: 347 GKGIKPGEYVRLAVIDTGVGMSESTLKRAFEPFFTTKREGHGTGLGLSMVFGFVRQSGGH 406
              +   E+VRL+++D G GMS   ++RA EPFFTTK  G GTGLGLSM +GFVRQSGG 
Sbjct: 466 ALELPASEFVRLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQ 525

Query: 407 VEMWSEEGKGSVVQMYFPHSLEPESLDVHIDQLPL----SSGQETILVVEDNEGVRLTVV 462
           + + S  G+G+ +++  P   E     +      L    S   + IL+VED   +RL + 
Sbjct: 526 LRVLSVPGEGTRIELLLPRHHEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTALRLVIG 585

Query: 463 ELLEQSGYTVLTADDGDQAMLKLQAGLQPELIFTDVVMPGRVKSTDLANWARAQNPPVAV 522
           E+LE+ GY V   ++G  A+  LQ+G +P+L+ +DV +PG +    +A   R + P + V
Sbjct: 586 EVLEELGYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKV 645

Query: 523 LFTSGHTRDILSSNHLLSADIHLLSKPYSPEALTQRVRSVL 563
           L  +G+      S+        +L+KP+  EAL +RVR +L
Sbjct: 646 LLITGYDESAAFSDGQPLQGTLVLTKPFELEALAERVRELL 686



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 148 VLAIVVETTELVKSEQVRQELTHNLEQRVAAEVQAR 183
           V  +  + TE  ++EQ  Q L   LEQRV A +  R
Sbjct: 141 VAVLFKDVTERRRAEQALQRLNEELEQRVNAALAER 176