Pairwise Alignments

Query, 570 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 705 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 2e-60
 Identities = 141/379 (37%), Positives = 210/379 (55%), Gaps = 13/379 (3%)

Query: 181 QARSAAEDQLRQSQKLEAIGGLTGGVAHDFNNLLQVIAGNLHLLARHEPDNA--QVQRRV 238
           +A   AE  +  S+++E +G L GG+ H+ NNLL  I G+L LL R   +    +V+  V
Sbjct: 318 EAARQAEALMHNSERMEVVGQLAGGMGHEMNNLLSGIGGSLELLQRRLQEGRLERVEAYV 377

Query: 239 AAAIAAVERGSKLSSQLLAFARRQPLSPAVYNPQRIYAGLGELLQRALGETIHIDVQLPQ 298
             A  +V+R   L+ +L+AF+R QPL+P   +  R       LL RALG  + +  QL  
Sbjct: 378 DVARDSVQRAMDLTHRLIAFSRHQPLAPRPLDFNRQLRLSEPLLLRALGAEMRLHWQLDV 437

Query: 299 DSWFINVDRNQLENALLNLAINARDAMNGEGVIRITGENIILN---PDDCAGKGIKPGEY 355
             W +++D  QLENAL++L  NAR+A   +G + I+  N  L    PD+    G+ PG+Y
Sbjct: 438 APWAVSLDVPQLENALIHLCANAREACLEQGNVTISSVNERLTAFFPDE---GGLPPGDY 494

Query: 356 VRLAVIDTGVGMSESTLKRAFEPFFTTKREGHGTGLGLSMVFGFVRQSGGHVEMWSEEGK 415
           V L V D G GM+ + + RAFEPF+TTK  G G GLGLSMV+GFVRQSGG+  + S   +
Sbjct: 495 VALHVEDDGHGMAAADIARAFEPFYTTKPLGRGAGLGLSMVYGFVRQSGGYAWIESTPEQ 554

Query: 416 GSVVQMYFPHSLEP---ESLDVHIDQLPLSSGQETILVVEDNEGVRLTVVELLEQSGYTV 472
           G+ V M FP S EP   E   V + Q  ++ G E +L+V+D   +R  + E L + G+ V
Sbjct: 555 GTRVSMLFPRSHEPVPDEPAPVPLSQ-RMARG-ERLLLVDDELDLRAVMREYLTERGFDV 612

Query: 473 LTADDGDQAMLKLQAGLQPELIFTDVVMPGRVKSTDLANWARAQNPPVAVLFTSGHTRDI 532
               D + A+ + + G   +L+ TD+ +PG      +A   R Q     +LF +G+    
Sbjct: 613 TDVGDANSALERFRHGGPFDLVITDIGLPGGFSGRQVAKAMRMQLAQQKILFITGYADQS 672

Query: 533 LSSNHLLSADIHLLSKPYS 551
           + +  L      LL+KP+S
Sbjct: 673 IEAQLLDQPGTALLNKPFS 691



 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 2/167 (1%)

Query: 17  MAQRIRAFDWATTDLGPIDKWSTSLTCTVQMMLASPVPMVMLWGQWGYMIYNDSYSVFAG 76
           M +RI  FDW  T LGP+ +W  SL   V MM  SP P  ++WG    +++N+ Y     
Sbjct: 45  MGERIAQFDWWRTSLGPLSRWPASLRIAVDMMHLSPFPCAVVWGADLCVVHNNGYRALRA 104

Query: 77  GRHPYLLGTPVELGWPEVAEFNRHVVDTCLAGGTLSFNNKDLVLLRNGKPETVWLDLYYS 136
              P  LG   +  W ++       V   L G +    +  L ++R+   E +W    Y+
Sbjct: 105 --LPDALGMAFDTLWSDIWPAVGPWVFKALEGHSNFVEDPPLRIVRSEGAEPLWCAFGYA 162

Query: 137 PVAGDNQQPAGVLAIVVETTELVKSEQVRQELTHNLEQRVAAEVQAR 183
           P+  +    AG L  V+ETT  V++ +  +E   + E++VA  V  R
Sbjct: 163 PLHDELGNVAGFLHTVIETTASVEAHRHWREQVQSFERQVAQHVAER 209