Pairwise Alignments

Query, 838 a.a., excinuclease ABC subunit A from Pseudomonas simiae WCS417

Subject, 886 a.a., Excinuclease ABC subunit A paralog of unknown function from Sphingobium sp. HT1-2

 Score = 1167 bits (3020), Expect = 0.0
 Identities = 591/877 (67%), Positives = 696/877 (79%), Gaps = 45/877 (5%)

Query: 7   TPAITAQQTG---FVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVYAEA 63
           TPA     TG    V++RGAR++NL+NVDVD+PR+A VVFTG+SGSGKSSLAF T+YAEA
Sbjct: 10  TPATDHGHTGPPACVQIRGARQNNLKNVDVDVPRNAFVVFTGISGSGKSSLAFGTLYAEA 69

Query: 64  QRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLIR 123
           QRRY ESVAPYARRLIDQ GVP+VD+I+GLPPAVALQQQRG+ +ARSSVGSVTTLSSL+R
Sbjct: 70  QRRYLESVAPYARRLIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVR 129

Query: 124 MLYSRAGSYPPGQPMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTIRQRAV 183
           MLYSR G YP  QPMLYAEDFSPN   GACP CHG+GRVY+ TE  MVPD +LTIR+RAV
Sbjct: 130 MLYSRVGEYPRHQPMLYAEDFSPNTVAGACPTCHGIGRVYDATEETMVPDDTLTIRERAV 189

Query: 184 ASWPLAWQGQNQRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPEQTRD 243
           A+WP AW GQN RDILV+LGY+VD PWRDLPKK RDWILFT+E PTVPVYAG TPEQTR 
Sbjct: 190 AAWPAAWHGQNLRDILVSLGYNVDTPWRDLPKKDRDWILFTDEAPTVPVYAGLTPEQTRV 249

Query: 244 ALKRKLEPSYQGTFMGARRYILHTFAHTQSALMKKRVSQFMQGSACPLCEGKRLTKAALS 303
           ALKR++EPSYQGTF GARRY+L TFA+T+SALMKKRVSQ++ G  CP C+GKRL + ALS
Sbjct: 250 ALKRRMEPSYQGTFTGARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDGKRLKREALS 309

Query: 304 VKFAGVDIGELSQLSLAQLAELLRPVAAGQ------------------------------ 333
           VKFAG+DI E   L++ +L +LL PVA G+                              
Sbjct: 310 VKFAGLDIAEFGDLTVLKLRDLLTPVAHGEYGGAAAVPKSHVLGKAARDAAVERRVAAGG 369

Query: 334 ----------DTMKLSVEKRLAAQRIAQDLLERVSTLTELGLGYLSLERSTPTLSSGELQ 383
                      T  LS EKR+AAQR+A +L+ER+  L +LGLGY+SL+RSTPTLSSGELQ
Sbjct: 370 SAHKSAPDVRRTPNLSDEKRIAAQRLASELIERLEPLIDLGLGYISLDRSTPTLSSGELQ 429

Query: 384 RLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTALDRLKAAGNSLFVVEHDLETMRR 443
           RLRLATQL SQLFGV+YVLDEPSAGLHPADGEAL T L+RLKAAGNSLFVVEHDL+ +RR
Sbjct: 430 RLRLATQLSSQLFGVVYVLDEPSAGLHPADGEALLTILERLKAAGNSLFVVEHDLDVIRR 489

Query: 444 ADWLIDVGPAAGEHGGQVLYSGPPAGLAQVQASQTRAYLFAEKRVSKQERRDPTGWLTLQ 503
           A+WL+DVGP AGE GG+VLYSGP  GLA V+ S TR YLFAE   S+   RD   WL L+
Sbjct: 490 AEWLVDVGPGAGEKGGEVLYSGPIEGLANVETSITRRYLFAEPLRSEHTPRDAKAWLRLE 549

Query: 504 GVTRNNLKDLNVDFPLGCFTAVTGISGSGKSSLVSQALLELVSAGLG--RVVENDEEPSL 561
           G+ RNNL  L+V+FP+GCFTAVTG+SGSGKSSLVSQAL ELV+  LG   V E ++   L
Sbjct: 550 GIRRNNLHGLDVEFPIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPVAEEEDIDPL 609

Query: 562 EDDAPQTSGGHIHAGLEHIRRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLFAATPAAKK 621
            D A   + G I AG+EH+RRLV+VDQKPIGRTPRSNL+TY+G+FD+VR++FA TP A++
Sbjct: 610 LDVAQNDTEGRIVAGMEHVRRLVRVDQKPIGRTPRSNLSTYSGMFDHVRRIFADTPLARR 669

Query: 622 RHYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAPCPTCHGARYNPETLAVKWQGL 681
           RHY  G+FSFNVA+GRCP CEGEG+V VELLF+PSV+APC TCHG+RYNP+TL V+W G 
Sbjct: 670 RHYSPGRFSFNVAQGRCPVCEGEGYVMVELLFLPSVFAPCSTCHGSRYNPQTLEVEWNGR 729

Query: 682 TIAQVLGLTVEQAVEVFAEQPSVLRSLQVLRDIGLGYLRLGQPATELSGGEAQRIKLATE 741
            IAQVL LTV+ A + FA + SV+RSL VLR+IGLGYLRLGQPATELSGGEAQRIKLATE
Sbjct: 730 NIAQVLELTVDDACDFFAGEASVMRSLDVLREIGLGYLRLGQPATELSGGEAQRIKLATE 789

Query: 742 LQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNHLVEAGHTVVVVEHEMRVVAQSDWVID 801
           LQR  RG T+Y+LDEPT+GLHP D DRL+  L  LVEAG+TVVVVEH+MR + Q+DW+ID
Sbjct: 790 LQRAQRGNTIYILDEPTSGLHPSDGDRLMRHLRGLVEAGNTVVVVEHDMRAITQADWIID 849

Query: 802 IGPGAGDLGGAVVASGTPQKVAKSKKSRTAAFLAKAL 838
           +GPGAG+ GG +VASG P  VA+++ S TA +L  AL
Sbjct: 850 LGPGAGEDGGRIVASGVPGVVAEAEGSLTARYLKAAL 886