Pairwise Alignments

Query, 838 a.a., excinuclease ABC subunit A from Pseudomonas simiae WCS417

Subject, 838 a.a., putative excinuclease ABC subunit A from Pseudomonas putida KT2440

 Score = 1319 bits (3414), Expect = 0.0
 Identities = 667/837 (79%), Positives = 728/837 (86%), Gaps = 6/837 (0%)

Query: 8   PAITAQQTGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVYAEAQRRY 67
           P      +GF+RVRGAREHNL+N+DVDIPRDALVVFTGVSGSGKSSLAFST+YAEAQRRY
Sbjct: 2   PPSPTTPSGFIRVRGAREHNLKNIDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRY 61

Query: 68  FESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLIRMLYS 127
           FESVAPYARRLIDQVGVPDVD+I+GLPPAVALQQQRGTPSARSSVGSVTTLSS IRMLYS
Sbjct: 62  FESVAPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPSARSSVGSVTTLSSSIRMLYS 121

Query: 128 RAGSYPPGQPMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTIRQRAVASWP 187
           RAG YPPGQ MLYAEDFSPN PQGACPQCHGLGRVYEVTEA MVPDPSLTIR+RAVA+WP
Sbjct: 122 RAGHYPPGQAMLYAEDFSPNTPQGACPQCHGLGRVYEVTEATMVPDPSLTIRERAVAAWP 181

Query: 188 LAWQGQNQRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPEQTRDALKR 247
           +AWQGQN RDILVTLGYDVDIPWRDLP+ QRDWILFTEETPT PVYAG TP QTR+ALKR
Sbjct: 182 MAWQGQNLRDILVTLGYDVDIPWRDLPQAQRDWILFTEETPTAPVYAGLTPAQTREALKR 241

Query: 248 KLEPSYQGTFMGARRYILHTFAHTQSALMKKRVSQFMQGSACPLCEGKRLTKAALSVKFA 307
           KLEPSYQGTFMGARRY+LHTF H+QSA M+KRV+Q+M  S CPLC+GKRL + AL+V FA
Sbjct: 242 KLEPSYQGTFMGARRYVLHTFMHSQSAQMRKRVAQYMHPSTCPLCQGKRLKREALAVTFA 301

Query: 308 GVDIGELSQLSLAQLAELLRPVAAG----QDTMKLSVEKRLAAQRIAQDLLERVSTLTEL 363
           G+DI ELS LSL  LAE+ R VAA     Q   +L++EKRLAAQRIA++LLER+ TL +L
Sbjct: 302 GLDIAELSHLSLQALAEVFRKVAAADYLTQQQDELTLEKRLAAQRIAKELLERIDTLLDL 361

Query: 364 GLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTALDR 423
           GLGYL+LERSTPTLSSGELQRLRLATQL SQLFGV+YVLDEPSAGLHPAD EALF AL R
Sbjct: 362 GLGYLALERSTPTLSSGELQRLRLATQLNSQLFGVVYVLDEPSAGLHPADSEALFEALQR 421

Query: 424 LKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEHGGQVLYSGPPAGLAQVQASQTRAYLF 483
           LK AGNS++VVEHDL+TMRRADWL+DVGPAAGEHGG +LYSGPPAGLA+VQ S TR YLF
Sbjct: 422 LKQAGNSVYVVEHDLDTMRRADWLVDVGPAAGEHGGTILYSGPPAGLAEVQQSCTRTYLF 481

Query: 484 AEKRVSKQERRDPTGWLTLQGVTRNNLKDLNVDFPLGCFTAVTGISGSGKSSLVSQALLE 543
                + +  R    WL L+G+TRNNL +L+  FPLGCFTAVTGISGSGKSSLVSQALLE
Sbjct: 482 DAPVQATRAPRQARDWLKLEGITRNNLDNLSAAFPLGCFTAVTGISGSGKSSLVSQALLE 541

Query: 544 LVSAGLGRVVEND--EEPSLEDDAPQTSGGHIHAGLEHIRRLVQVDQKPIGRTPRSNLAT 601
           LV A LG   +    E  SLED+  QTS GH+ AGL  I+RLVQVDQKPIGRTPRSNLAT
Sbjct: 542 LVGAHLGHAEQRSEPEAQSLEDEPEQTSSGHVSAGLGSIKRLVQVDQKPIGRTPRSNLAT 601

Query: 602 YTGLFDNVRKLFAATPAAKKRHYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAPC 661
           YTGLFD+VRK FAAT  AK + +DAG+FSFNVAKGRC NCEGEGFVSVELLFMPSVYAPC
Sbjct: 602 YTGLFDHVRKCFAATEQAKAQGFDAGRFSFNVAKGRCANCEGEGFVSVELLFMPSVYAPC 661

Query: 662 PTCHGARYNPETLAVKWQGLTIAQVLGLTVEQAVEVFAEQPSVLRSLQVLRDIGLGYLRL 721
           PTC GARYNPETLAV WQG+ IAQVL LTV+QA++VFAEQP   R LQVL+DIGLGYLRL
Sbjct: 662 PTCQGARYNPETLAVSWQGMNIAQVLQLTVDQALQVFAEQPPARRCLQVLQDIGLGYLRL 721

Query: 722 GQPATELSGGEAQRIKLATELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNHLVEAGH 781
           GQPATELSGGEAQRIKLATELQR ARGATLYVLDEPT GLHP+D+DRLL QLN LVE+GH
Sbjct: 722 GQPATELSGGEAQRIKLATELQRMARGATLYVLDEPTNGLHPQDIDRLLVQLNRLVESGH 781

Query: 782 TVVVVEHEMRVVAQSDWVIDIGPGAGDLGGAVVASGTPQKVAKSKKSRTAAFLAKAL 838
           +VVVVEH+MRVVAQSDWVIDIGPGAGD GG VV SGTPQ VA    SRTA FLAKAL
Sbjct: 782 SVVVVEHDMRVVAQSDWVIDIGPGAGDAGGKVVVSGTPQVVAACTDSRTATFLAKAL 838