Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 8e-41
 Identities = 124/452 (27%), Positives = 188/452 (41%), Gaps = 62/452 (13%)

Query: 37  GFLEDSHAAISSRTMYYSADNRSG----TNNDLREA-ATALRFDYKSGFTQGTIGLGFDV 91
           GF+E S   + +R  Y++ D+R G    T N   EA A  L   ++SGFTQGT+G G D 
Sbjct: 29  GFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGLIGRFESGFTQGTVGFGLDA 88

Query: 92  MAFGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVG 151
            A   ++LD G G + G G  G      P  ++   P D++ +  G  K R+  T +   
Sbjct: 89  FAMVGVKLDSGTGRSGGKGSFG----VLPV-DSSNHPEDNYSKVGGAAKLRVLDTVIK-A 142

Query: 152 GGLAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAG 211
           G + P+ P++   DSRV P++F G    +  +  ++  GG L      A S        G
Sbjct: 143 GDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQPAQS--------G 194

Query: 212 GTRDSDSFKFGGVDYKPFG--SSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPLGND 269
             +   +F  G VD    G    D  + KNL+   Y ++L+D + Q YFG     PL ++
Sbjct: 195 MDKGFATFYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYFGSAARYPLNDE 254

Query: 270 QSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLMLGH 329
            S   D  Y+ +  +GK               K     DN  +SA    ++G  SL + H
Sbjct: 255 VSLFGDFNYYKAVDEGK---------------KRLGAFDNNIWSARLGVKVGAHSLAVSH 299

Query: 330 IGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY 389
                D  F ++ Q                +L        F+   E+    +Y  D +A+
Sbjct: 300 QRNNGDDDFDYLRQ------------SDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAF 347

Query: 390 -VPGLKASVAYLDGRD----------IKSKVAGGP--DQKENEADFRLDYVVQAGPLKGF 436
            +PGL     Y  G            ++   AG P  DQ+  E D    YVVQAG LK  
Sbjct: 348 GIPGLSFMTRYGKGSGADYSNANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDL 407

Query: 437 GTTFRTGTYHGKNTGTADQDQTRLIFNYTYAI 468
               R  T    +   +D ++ R+I  Y  A+
Sbjct: 408 SLRLRQATVR-SSAFESDLEEVRVIVEYPIAV 438