Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 438 a.a., porin from Pseudomonas simiae WCS417

 Score =  288 bits (736), Expect = 3e-82
 Identities = 177/443 (39%), Positives = 243/443 (54%), Gaps = 43/443 (9%)

Query: 36  SGFLEDSHAAISSRTMYYSADNRSGTNNDLREAATALRFDYKSGFTQGTIGLGFDVMAFG 95
           SGF++DS A++  R  YY+ D R+      +E   A  F+Y+SGFT+GT+GLG D+  + 
Sbjct: 22  SGFIDDSKASLDLRNFYYNQDTRNAKAASDKEWGQAFMFNYQSGFTEGTVGLGLDLQEWY 81

Query: 96  ALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGGGLA 155
            LRLD   G    AG      S FP  +   +    F +     K RI+QT+L   G L 
Sbjct: 82  GLRLD-ASGRAGKAGADNTPGSVFPLDDG--KAVHDFSKTGVTGKLRIAQTQLK-AGNLM 137

Query: 156 PVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAGGT-- 213
           P LP+L + D R+ PQTF G  + S D  +V    G++ +   R SSN  GLS+AG    
Sbjct: 138 PKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNGQGLSIAGANDP 197

Query: 214 ---RDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVH--VLPLGN 268
              + S+ F +GGVDY         ++K L +QYYYA L++FY+Q++ GLVH   LP+G 
Sbjct: 198 VKGKASNQFYYGGVDY--------AVSKRLQVQYYYASLENFYQQHFLGLVHNWQLPVG- 248

Query: 269 DQSFKTDLRYFDSSSDGKNGE-----SGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGS 323
               K+DLRYF S++DGKNG       GY  +   G   +A +VDN+ +SA FTY L G 
Sbjct: 249 --QLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSGH 306

Query: 324 SLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYS 383
           SL LG+        F  +NQG           G   YL T++   +F  AGEQ   G Y+
Sbjct: 307 SLSLGYQKTTGQSDFPHINQGQ----------GRSLYLITNSQSLKFVNAGEQATVGSYA 356

Query: 384 YDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFRT 442
           YDF    VPGL++SV Y+ G  I++    G D  E E D RLDYV+  G LKG G T+R+
Sbjct: 357 YDFAGLGVPGLRSSVTYIHGSHIRTV---GRDNSEWERDLRLDYVIPTGTLKGLGFTWRS 413

Query: 443 GTYHGKNTGTADQDQTRLIFNYT 465
               G +  TAD+D+TRLI +Y+
Sbjct: 414 AVLRGND--TADKDETRLIVSYS 434