Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  161 bits (408), Expect = 4e-44
 Identities = 142/480 (29%), Positives = 208/480 (43%), Gaps = 61/480 (12%)

Query: 4   STLALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSADNRSGTNN 63
           S LAL++ A + +Q AFA+     S+       GF+E S      R  YY   NR G   
Sbjct: 6   SLLALAVCAGI-SQMAFAE-----SVTDQADSKGFIEGSSVTGLLRN-YYMNRNREGGRA 58

Query: 64  DLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTKN 123
           D  +       +Y SGFTQGTIG G D  A+G L+LD      A    +G GN   PT  
Sbjct: 59  DNIDWTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLD------ATHADAGTGN--LPTDR 110

Query: 124 NGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSNDI 183
           +G +P D++G     VK ++S+T+L   G + P  P+  +  +R+ PQT  G  LTS++I
Sbjct: 111 HG-DPEDAYGSVGAAVKIKVSKTQLKF-GDMQPTAPVFATGGTRLLPQTATGFDLTSSEI 168

Query: 184 PNVTFTGGELNRAEGRASSN---STGLSVAGGTRDSDSFKFGGVDYKPFGSSDNVIAKNL 240
             +    G         +SN       + A    +S SF  G   + P          +L
Sbjct: 169 AGLDLEAGHFTSTNSGMTSNHDHDIYATYANIAANSASFLGGKYTFSP----------SL 218

Query: 241 TLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGY 300
           +   Y  +L+D ++Q Y  L +V+PL +DQS   D   + +   G               
Sbjct: 219 SATVYAGELEDIWRQYYTNLNYVIPLVHDQSLALDGNLYRTLDTG--------------- 263

Query: 301 AKHANEVDNKTYSAAFTYQ-LGGSSLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDF 359
           +  A  ++N TYS A  Y  L   +L L    V  D  F ++  G+    +  G GG   
Sbjct: 264 SAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGN----NGAGEGGDSV 319

Query: 360 YLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIK-------SKVAG 411
           YL      G F+  GEQ    +Y  +  +Y VPGL     Y++G DI        S  AG
Sbjct: 320 YLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDHSAYAG 379

Query: 412 --GPDQKENEADFRLDYVVQAGPLKGFGTTFRTGTYHGK-NTGTADQDQTRLIFNYTYAI 468
             G D   +E D    YV+Q+GP K      R        +    D ++ RLI +Y + +
Sbjct: 380 DYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRDGDLNELRLIVDYPFTL 439